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Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS14025 and LRK54_RS14030 are separated by 252 nucleotides
LRK54_RS14030 and LRK54_RS14035 overlap by 8 nucleotides
LRK54_RS14035 and LRK54_RS14040 are separated by 27 nucleotides
LRK54_RS14040 and LRK54_RS14045 are separated by 326 nucleotides
LRK54_RS14025: LRK54_RS14025 - tellurite resistance/C4-dicarboxylate transporter family protein, at 3,130,047 to 3,131,108
_RS14025
LRK54_RS14030: LRK54_RS14030 - molybdenum ABC transporter ATP-binding protein, at 3,131,361 to 3,132,434
_RS14030
LRK54_RS14035: LRK54_RS14035 - molybdate ABC transporter permease subunit, at 3,132,427 to 3,133,101
_RS14035
LRK54_RS14040: LRK54_RS14040 - molybdate ABC transporter substrate-binding protein, at 3,133,129 to 3,133,905
_RS14040
LRK54_RS14045: LRK54_RS14045 - hypothetical protein, at 3,134,232 to 3,134,723
_RS14045
Group
Condition
LRK54
_RS14025
LRK54
_RS14030
LRK54
_RS14035
LRK54
_RS14040
LRK54
_RS14045
anaerobic
Anaerobic, acetate donor; nitrate and iron electron acceptors
-1.3
-2.5
-2.6
-2.7
-0.3
anaerobic
Anaerobic, acetate donor; nitrate and iron electron acceptors
-1.1
-2.9
-2.3
-2.8
-0.1
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
-0.9
-1.7
-1.5
-1.9
+0.1
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
-0.7
-1.2
-1.2
-1.3
+0.2
phage
S3-T1
-0.4
-0.2
-0.2
-0.4
-0.4
phage
3C-T2
-0.3
-0.3
-0.3
-0.4
-0.3
no phage control
No phage control
-0.3
-0.4
-0.2
-0.2
-0.4
phage
SA-T2
-0.4
-0.3
-0.2
-0.3
-0.2
phage
3E-T1
-0.3
-0.4
-0.0
-0.3
-0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.2
-0.4
-0.2
-0.2
-0.1
phage
2E-T1
-0.2
-0.5
-0.3
-0.1
-0.0
phage
S3-T2
-0.2
-0.5
+0.1
-0.3
-0.2
stress
R2A with lithium chloride 15.625 mM
-0.2
-0.3
-0.2
-0.0
-0.2
phage
2B-T1
-0.1
-0.2
-0.2
-0.1
-0.3
phage
3E-T2
-0.1
-0.3
+0.1
-0.0
-0.4
phage
1A-T1
-0.1
-0.1
-0.2
-0.3
-0.1
stress
R2A with silver chloride 1 mM
-0.0
-0.2
-0.2
-0.3
+0.0
stress
R2A with Chloride 250 mM
-0.2
-0.1
-0.3
-0.3
+0.1
phage
3B-T1
-0.2
-0.2
+0.2
-0.2
-0.2
phage
1E-T2
-0.2
-0.0
+0.1
-0.3
-0.2
stress
R2A with bismuth(III) chloride 0.03125 mM
-0.2
+0.3
-0.1
-0.2
-0.1
stress
R2A with silver chloride 1 mM
-0.0
-0.1
+0.3
-0.3
+0.0
phage
phage 31.1
+0.2
-0.3
+0.2
-0.1
+0.1
biofilm assay; planktonic sample
planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
-0.1
+0.3
-0.2
+0.1
+0.1
biofilm assay; planktonic sample
Planktonic; Day4; SGW; pH7
-0.1
+0.3
-0.1
+0.2
+0.2
stress
R2A with Nickel (II) chloride 0.3125 mM
-0.1
+0.3
-0.0
+0.2
+0.2
stress
R2A with Selective_ion_mix_1 1 X
+0.2
+0.3
+0.3
+0.1
-0.0
biofilm assay; biofilm sample
biofilm; Day2; NLDM;
-0.2
+0.2
+0.2
+0.2
+0.5
stress
R2A with chromate 0.0048828125 mM
+0.3
-0.0
+0.3
+0.3
+0.1
stress
R2A with Zinc chloride 0.625 mM
-0.1
+0.8
+0.0
+0.3
+0.0
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