Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS13945 and LRK54_RS13950 are separated by 77 nucleotidesLRK54_RS13950 and LRK54_RS13955 are separated by 251 nucleotidesLRK54_RS13955 and LRK54_RS13960 overlap by 4 nucleotidesLRK54_RS13960 and LRK54_RS13965 overlap by 4 nucleotides LRK54_RS13945: LRK54_RS13945 - molybdopterin-synthase adenylyltransferase MoeB, at 3,111,968 to 3,113,146 _RS13945 LRK54_RS13950: LRK54_RS13950 - hypothetical protein, at 3,113,224 to 3,113,628 _RS13950 LRK54_RS13955: LRK54_RS13955 - GTP 3',8-cyclase MoaA, at 3,113,880 to 3,114,860 _RS13955 LRK54_RS13960: LRK54_RS13960 - bifunctional molybdenum cofactor biosynthesis protein MoaC/MoaB, at 3,114,857 to 3,115,864 _RS13960 LRK54_RS13965: LRK54_RS13965 - molybdopterin molybdotransferase MoeA, at 3,115,861 to 3,117,114 _RS13965
Group Condition LRK54_RS13945 LRK54_RS13950 LRK54_RS13955 LRK54_RS13960 LRK54_RS13965
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors -3.1 N.D. -2.8 -2.8 -3.9
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors -3.1 N.D. -3.0 -3.1 -2.5
anaerobic Anaerobic, acetate donor; nitrate electron acceptor -2.0 N.D. -1.8 -1.8 -2.0
anaerobic Anaerobic, acetate donor; nitrate electron acceptor -1.3 N.D. -1.1 -1.2 -1.0
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.1 N.D. -0.6 -0.1 -1.0
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.4 N.D. -0.1 -0.5 -0.4
phage phage 31.1 -0.2 N.D. -0.1 +0.0 -1.2
phage 3E-T2 -0.2 N.D. -0.0 -0.3 -0.8
no phage control No phage control -0.3 N.D. -0.0 -0.4 -0.6
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.2 N.D. -0.4 -0.0 -0.5
phage 3C-T2 -0.4 N.D. -0.1 -0.3 -0.4
stress R2A with Selective_ion_mix_1 1 X -0.2 N.D. -0.3 -0.3 -0.3
stress R2A with Zinc chloride 0.625 mM -0.3 N.D. -0.1 +0.0 -0.7
phage S3-T1 -0.1 N.D. -0.3 -0.3 -0.3
phage 2B-T1 -0.2 N.D. -0.3 +0.0 -0.5
biofilm assay; planktonic sample planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.2 N.D. -0.3 -0.1 -0.4
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.2 N.D. -0.2 +0.1 -0.5
phage 2F-T2 -0.3 N.D. +0.4 -0.3 -0.6
phage 1B-T1 -0.1 N.D. +0.3 -0.4 -0.5
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.4 N.D. -0.3 +0.1 +0.2
stress R2A with bismuth(III) chloride 0.03125 mM +0.1 N.D. -0.8 +0.3 +0.1
biofilm assay; biofilm sample biofilm; Day1; NLDM; -0.2 N.D. -0.2 -0.2 +0.4
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 -0.1 N.D. -0.1 -0.4 +0.5
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM +0.1 N.D. +0.2 +0.3 -0.6
stress R2A with chromate 0.0048828125 mM +0.3 N.D. +0.3 -0.1 -0.4
phage 1C-T2 +0.5 N.D. +0.1 -0.1 -0.3
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -0.0 N.D. -0.2 -0.2 +0.7
carbon source acetate 20 mM -0.1 N.D. -0.0 -0.2 +0.7
phage 1E-T1 +0.3 N.D. +0.4 +0.0 -0.3
carbon source D-Glucose (C) and 20 AA mix; 30C +0.2 N.D. -0.3 -0.0 +0.9
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