Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS13630 and LRK54_RS13635 are separated by 13 nucleotidesLRK54_RS13635 and LRK54_RS13640 are separated by 10 nucleotidesLRK54_RS13640 and LRK54_RS13645 are separated by 146 nucleotidesLRK54_RS13645 and LRK54_RS13650 are separated by 138 nucleotides LRK54_RS13630: LRK54_RS13630 - STAS domain-containing protein, at 3,047,451 to 3,047,852 _RS13630 LRK54_RS13635: LRK54_RS13635 - response regulator, at 3,047,866 to 3,048,228 _RS13635 LRK54_RS13640: LRK54_RS13640 - chemotaxis protein CheA, at 3,048,239 to 3,050,230 _RS13640 LRK54_RS13645: LRK54_RS13645 - methyl-accepting chemotaxis protein, at 3,050,377 to 3,052,080 _RS13645 LRK54_RS13650: LRK54_RS13650 - chemotaxis protein CheW, at 3,052,219 to 3,052,725 _RS13650
Group Condition LRK54_RS13630 LRK54_RS13635 LRK54_RS13640 LRK54_RS13645 LRK54_RS13650
biofilm assay; biofilm sample biofilm; Day2; NLDM; N.D. -0.9 -0.7 +0.3 -1.0
stress R2A with chromate 0.0048828125 mM N.D. -1.4 -0.1 -0.2 -0.1
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 N.D. -0.7 -0.3 -0.6 -0.1
phage 4E-T1 N.D. -0.6 -0.8 -0.3 -0.0
stress R2A with Calcium chloride 250 mM N.D. -0.0 -0.5 -0.4 -0.8
biofilm assay; biofilm sample biofilm; Day1; NLDM; N.D. -0.5 -1.1 +0.0 -0.1
stress R2A with Ferric chloride 1.5625 mM N.D. +0.1 -0.9 -0.5 -0.4
stress R2A with ammonium iron(II) sulfate 2.5 mM N.D. -0.3 -0.6 -0.3 -0.4
stress R2A with Nickel (II) chloride 0.3125 mM N.D. -0.4 -0.5 -0.2 -0.5
phage SA-T2 N.D. -0.7 -0.8 +0.0 -0.1
stress R2A with Gallium(III)chloride 0.78125 mM N.D. -0.8 -0.3 -0.2 -0.1
stress R2A with Chloride 250 mM N.D. -0.3 -0.5 -0.3 -0.3
phage 3E-T1 N.D. -0.8 +0.0 -0.3 -0.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; N.D. -0.4 -0.2 +0.2 -0.9
stress R2A with selenate 31.25 mM N.D. -0.2 -0.9 -0.2 +0.1
phage S5-T1 N.D. -0.7 -0.4 -0.2 +0.1
biofilm assay; biofilm sample biofilm; Day1; NLDM; N.D. -0.6 -0.4 +0.1 -0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; N.D. -0.1 -0.6 +0.1 -0.5
biofilm assay; biofilm sample biofilm; Day1; NLDM; N.D. -0.2 -0.5 +0.3 -0.5
stress R2A with Barium chloride 1.25 mM N.D. +0.2 -0.5 -0.4 -0.2
stress R2A with chromate 0.0048828125 mM N.D. -0.7 +0.4 -0.1 -0.4
phage 4B-T1 N.D. -0.8 -0.1 -0.1 +0.5
stress R2A with Selective_ion_mix_1 1 X N.D. -0.8 +0.0 +0.3 +0.3
stress R2A with bismuth(III) chloride 0.03125 mM N.D. +0.5 -0.5 -0.6 +0.7
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 N.D. +0.3 -0.1 -0.7 +0.8
phage 4B-T2 N.D. -0.5 +0.4 +0.3 +0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM N.D. +0.8 +0.3 +0.2 -0.1
anaerobic Anaerobic, acetate donor; nitrate electron acceptor N.D. +0.5 +0.2 +0.1 +0.5
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM N.D. +0.5 +0.2 +0.2 +0.6
carbon source D-Trehalose 20 mM N.D. +0.8 +0.8 +0.6 +0.7
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