Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS13415 and LRK54_RS13420 are separated by 37 nucleotidesLRK54_RS13420 and LRK54_RS13425 are separated by 146 nucleotidesLRK54_RS13425 and LRK54_RS13430 are separated by 50 nucleotidesLRK54_RS13430 and LRK54_RS13435 are separated by 11 nucleotides LRK54_RS13415: LRK54_RS13415 - flagellar hook capping protein, at 3,005,765 to 3,006,403 _RS13415 LRK54_RS13420: LRK54_RS13420 - flagellar hook protein FlgE, at 3,006,441 to 3,007,664 _RS13420 LRK54_RS13425: LRK54_RS13425 - flagellar basal-body rod protein FlgF, at 3,007,811 to 3,008,551 _RS13425 LRK54_RS13430: LRK54_RS13430 - flagellar basal-body rod protein FlgG, at 3,008,602 to 3,009,387 _RS13430 LRK54_RS13435: LRK54_RS13435 - flagellar basal body L-ring protein FlgH, at 3,009,399 to 3,010,079 _RS13435
Group Condition LRK54_RS13415 LRK54_RS13420 LRK54_RS13425 LRK54_RS13430 LRK54_RS13435
biofilm assay; biofilm sample biofilm; Day1; NLDM; -0.8 -0.8 -2.2 -0.9 -0.8
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -0.4 -0.6 -2.9 -0.7 -0.3
biofilm assay; biofilm sample biofilm; Day1; NLDM; -0.4 -0.5 -1.4 -1.0 -0.3
stress R2A with ammonium iron(II) sulfate 2.5 mM -0.2 -0.5 -0.6 -0.9 -0.5
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -0.3 -0.4 -1.0 -0.5 -0.4
stress R2A with Cadmium chloride hemipentahydrate 0.0390625 mM +0.2 +0.3 -1.3 +0.5 +0.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.7 +0.5 -0.4 +0.4 +0.9
stress R2A with bismuth(III) chloride 0.03125 mM -0.3 +0.2 +1.6 +0.2 +0.6
carbon source L-Glutamic 20 mM +0.4 +0.5 +0.7 +0.5 +0.5
carbon source D-Glucose 20 mM +0.5 +0.5 +0.4 +0.6 +0.6
carbon source D-Maltose 20 mM +0.5 +0.4 +0.8 +0.5 +0.4
pH R2A pH5 +0.3 +0.4 +0.9 +0.6 +0.5
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors +0.7 +0.6 +0.2 +0.5 +0.6
pH R2A pH6 +0.4 +0.4 +0.7 +0.8 +0.4
pH R2A pH7 +0.4 +0.4 +0.6 +0.7 +0.5
carbon source Gly-Glu 20 mM +0.3 +0.5 +0.4 +0.7 +0.8
pH R2A pH6 +0.2 +0.4 +1.0 +0.7 +0.5
anaerobic Anaerobic, acetate donor; nitrate electron acceptor +0.5 +0.6 +0.6 +0.6 +0.5
stress R2A with Magnesium sulfate 3.90625 mM +0.3 +0.7 +0.7 +0.6 +0.6
stress R2A with m-arsenite 0.078125 mM +0.4 +0.4 +0.9 +0.9 +0.3
carbon source casaminos 2 mg/mL +0.5 +0.7 +0.8 +0.4 +0.6
carbon source L-Glutamic 20 mM +0.6 +0.7 +0.7 +0.6 +0.5
stress R2A with Magnesium sulfate 3.90625 mM +0.3 +0.7 +0.8 +0.7 +0.7
carbon source Gly-Glu 20 mM +0.4 +0.8 +0.7 +0.6 +0.7
carbon source casaminos 2 mg/mL +0.7 +0.7 +1.0 +0.6 +0.6
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.8 +1.0 +0.6 +0.9 +1.2
anaerobic Anaerobic, acetate donor; nitrate electron acceptor +0.6 +1.0 +1.2 +1.0 +0.7
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.9 +1.1 +1.4 +0.9 +1.5
carbon source D-Trehalose 20 mM +1.1 +1.2 +1.1 +1.4 +1.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +1.0 +1.5 +1.4 +1.6 +1.3
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