Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS13275 and LRK54_RS13280 are separated by 67 nucleotidesLRK54_RS13280 and LRK54_RS13285 are separated by 121 nucleotidesLRK54_RS13285 and LRK54_RS13290 are separated by 279 nucleotidesLRK54_RS13290 and LRK54_RS13295 are separated by 628 nucleotides LRK54_RS13275: LRK54_RS13275 - PEP-CTERM system histidine kinase PrsK, at 2,978,479 to 2,980,560 _RS13275 LRK54_RS13280: LRK54_RS13280 - UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing), at 2,980,628 to 2,981,902 _RS13280 LRK54_RS13285: LRK54_RS13285 - ThiF family adenylyltransferase, at 2,982,024 to 2,982,950 _RS13285 LRK54_RS13290: LRK54_RS13290 - PEP-CTERM sorting domain-containing protein, at 2,983,230 to 2,984,039 _RS13290 LRK54_RS13295: LRK54_RS13295 - hypothetical protein, at 2,984,668 to 2,985,723 _RS13295
Group Condition LRK54_RS13275 LRK54_RS13280 LRK54_RS13285 LRK54_RS13290 LRK54_RS13295
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.3 -0.0 -0.3 -0.5 +0.0
stress R2A with nitrite 25 mM -0.2 -0.3 -0.3 -0.2 -0.1
stress R2A with Chloride 250 mM -0.0 -0.3 -0.3 -0.2 -0.4
stress R2A with lead(II) chloride 0.625 mM -0.2 -0.2 -0.4 -0.2 -0.2
stress R2A with silver chloride 1 mM -0.1 -0.2 -0.2 -0.2 -0.3
stress R2A with Magnesium sulfate 3.90625 mM -0.1 -0.2 -0.3 -0.3 -0.2
stress R2A with Chloride 250 mM -0.1 -0.3 -0.2 -0.2 -0.3
stress R2A with Cesium chloride 3.90625 mM -0.1 -0.2 -0.2 -0.2 -0.2
stress R2A with Cesium chloride 3.90625 mM -0.1 -0.0 -0.5 -0.3 -0.2
stress R2A with Uranyl acetate 2.5 mM -0.2 -0.2 -0.3 -0.1 -0.2
r2a_control R2A control -0.1 -0.1 -0.3 -0.3 -0.2
stress R2A with Ferric chloride 1.5625 mM +0.0 -0.2 -0.2 -0.3 -0.4
stress R2A with sodium bromide 250 mM -0.0 -0.3 -0.2 -0.2 -0.3
stress R2A with Chloride 250 mM -0.1 -0.2 -0.2 -0.1 -0.3
stress R2A with lithium chloride 15.625 mM -0.1 -0.1 -0.3 -0.1 -0.3
stress R2A with silver chloride 1 mM -0.0 -0.1 -0.2 -0.4 -0.3
stress R2A with Strontium chloride 3.90625 mM -0.2 -0.0 -0.3 -0.1 -0.2
stress R2A with Barium chloride 1.25 mM -0.1 -0.2 -0.2 -0.2 -0.1
r2a_control R2A control -0.1 -0.2 -0.3 -0.1 -0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; -0.3 +0.4 -0.2 -0.1 -0.1
pH R2A_PIPES pH 4.25 +0.1 -0.1 -0.5 +0.1 +0.1
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 -0.2 -0.4 -0.3 +0.1 +0.5
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.2 +0.3 +0.1 -0.3 -0.1
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.1 +0.0 -0.5 +0.3 +0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.3 +0.1 +0.3 +0.2 -0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.0 +0.5 -0.6 +0.4 -0.0
stress R2A with Nickel (II) chloride 0.3125 mM -0.1 +0.2 +0.5 -0.2 +0.1
phage 2B-T2 +0.2 -0.2 +0.2 +0.1 +0.3
stress R2A_PIPES with Aluminum chloride 1.125 mM -0.1 +0.1 +0.4 +0.2 +0.2
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.2 +0.5 +0.3 -0.1 +0.1
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