Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS13250 and LRK54_RS13255 are separated by 529 nucleotidesLRK54_RS13255 and LRK54_RS13260 overlap by 4 nucleotidesLRK54_RS13260 and LRK54_RS13265 are separated by 27 nucleotidesLRK54_RS13265 and LRK54_RS13270 overlap by 11 nucleotides LRK54_RS13250: LRK54_RS13250 - hypothetical protein, at 2,970,544 to 2,972,835 _RS13250 LRK54_RS13255: LRK54_RS13255 - phosphatidylserine decarboxylase, at 2,973,365 to 2,974,054 _RS13255 LRK54_RS13260: LRK54_RS13260 - hypothetical protein, at 2,974,051 to 2,974,248 _RS13260 LRK54_RS13265: LRK54_RS13265 - PEP-CTERM system TPR-repeat protein PrsT, at 2,974,276 to 2,977,131 _RS13265 LRK54_RS13270: LRK54_RS13270 - PEP-CTERM-box response regulator transcription factor, at 2,977,121 to 2,978,482 _RS13270
Group Condition LRK54_RS13250 LRK54_RS13255 LRK54_RS13260 LRK54_RS13265 LRK54_RS13270
stress R2A with chromate 0.0048828125 mM -0.0 -0.3 -0.4 -0.3 -0.3
stress R2A with Nickel (II) chloride 0.3125 mM -0.2 -0.2 -0.5 -0.0 -0.3
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM -0.0 -0.3 -0.4 +0.0 -0.5
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.0 -0.4 -0.4 -0.1 -0.3
stress R2A with Selective_ion_mix_1 1 X -0.0 -0.2 -0.3 -0.1 -0.4
pH R2A pH7 -0.1 -0.1 -0.2 -0.1 -0.4
stress R2A with bismuth(III) chloride 0.03125 mM +0.0 -0.1 -0.4 +0.1 -0.3
phage 1E-T1 -0.0 +0.2 -0.7 -0.1 -0.1
stress R2A with chromate 0.0048828125 mM -0.3 -0.2 +0.4 -0.3 -0.4
stress R2A with copper (II) chloride 0.3125 mM -0.2 +0.1 -0.4 -0.1 -0.1
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.1 +0.5 -1.4 +0.1 +0.0
pH R2A_PIPES pH 4.25 +0.0 +0.3 -0.3 +0.0 -0.6
stress R2A with Cobalt chloride 0.15625 mM +0.0 -0.2 -0.4 -0.1 +0.1
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM -0.2 -0.1 +0.2 -0.1 -0.2
stress R2A_PIPES with Nickel (II) chloride 424 uM +0.1 +0.2 -0.6 -0.0 +0.0
biofilm assay; planktonic sample planktonic; Day2; NLDM; -0.1 -0.3 +0.3 -0.1 -0.2
phage SA-T2 +0.1 -0.1 -0.5 +0.1 +0.2
carbon source a-Cyclodextrin 20 mM -0.1 -0.3 -0.2 +0.1 +0.3
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM +0.0 +0.4 -0.6 +0.1 -0.0
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM +0.0 +0.2 -0.4 +0.2 -0.2
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 -0.0 +0.2 +0.4 +0.2 -0.7
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.1 -0.1 +0.5 -0.0 -0.2
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors -0.1 +0.5 -0.1 +0.1 -0.2
phage 4B-T2 +0.2 -0.2 -0.1 +0.2 +0.3
no phage control No phage control +0.1 -0.2 +0.4 +0.1 +0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.1 +0.2 +0.6 -0.0 -0.2
stress R2A with silver chloride 1 mM -0.0 +0.3 +0.6 -0.1 -0.1
phage 4B-T1 +0.3 +0.2 +0.3 -0.1 -0.0
phage 1B-T1 +0.2 +0.2 +0.3 +0.2 +0.1
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.1 +0.3 +0.8 +0.1 +0.1
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