Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 314 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
LRK54_RS13250 and LRK54_RS13255 are separated by 529 nucleotides
LRK54_RS13255 and LRK54_RS13260 overlap by 4 nucleotides
LRK54_RS13260 and LRK54_RS13265 are separated by 27 nucleotides
LRK54_RS13265 and LRK54_RS13270 overlap by 11 nucleotides
LRK54_RS13250: LRK54_RS13250 - hypothetical protein, at 2,970,544 to 2,972,835
_RS13250
LRK54_RS13255: LRK54_RS13255 - phosphatidylserine decarboxylase, at 2,973,365 to 2,974,054
_RS13255
LRK54_RS13260: LRK54_RS13260 - hypothetical protein, at 2,974,051 to 2,974,248
_RS13260
LRK54_RS13265: LRK54_RS13265 - PEP-CTERM system TPR-repeat protein PrsT, at 2,974,276 to 2,977,131
_RS13265
LRK54_RS13270: LRK54_RS13270 - PEP-CTERM-box response regulator transcription factor, at 2,977,121 to 2,978,482
_RS13270
Group
Condition
LRK54
_RS13250
LRK54
_RS13255
LRK54
_RS13260
LRK54
_RS13265
LRK54
_RS13270
stress
R2A with chromate 0.0048828125 mM
-0.0
-0.3
-0.4
-0.3
-0.3
stress
R2A with Nickel (II) chloride 0.3125 mM
-0.2
-0.2
-0.5
-0.0
-0.3
stress
R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
-0.0
-0.3
-0.4
+0.0
-0.5
biofilm assay; biofilm sample
biofilm; Day2; NLDM; Aluminum chloride 1mM
+0.0
-0.4
-0.4
-0.1
-0.3
stress
R2A with Selective_ion_mix_1 1 X
-0.0
-0.2
-0.3
-0.1
-0.4
pH
R2A pH7
-0.1
-0.1
-0.2
-0.1
-0.4
stress
R2A with bismuth(III) chloride 0.03125 mM
+0.0
-0.1
-0.4
+0.1
-0.3
phage
1E-T1
-0.0
+0.2
-0.7
-0.1
-0.1
stress
R2A with chromate 0.0048828125 mM
-0.3
-0.2
+0.4
-0.3
-0.4
stress
R2A with copper (II) chloride 0.3125 mM
-0.2
+0.1
-0.4
-0.1
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
+0.5
-1.4
+0.1
+0.0
pH
R2A_PIPES pH 4.25
+0.0
+0.3
-0.3
+0.0
-0.6
stress
R2A with Cobalt chloride 0.15625 mM
+0.0
-0.2
-0.4
-0.1
+0.1
stress
R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM
-0.2
-0.1
+0.2
-0.1
-0.2
stress
R2A_PIPES with Nickel (II) chloride 424 uM
+0.1
+0.2
-0.6
-0.0
+0.0
biofilm assay; planktonic sample
planktonic; Day2; NLDM;
-0.1
-0.3
+0.3
-0.1
-0.2
phage
SA-T2
+0.1
-0.1
-0.5
+0.1
+0.2
carbon source
a-Cyclodextrin 20 mM
-0.1
-0.3
-0.2
+0.1
+0.3
biofilm assay; planktonic sample
planktonic; Day2; NLDM; Aluminum chloride 1mM
+0.0
+0.4
-0.6
+0.1
-0.0
biofilm assay; planktonic sample
planktonic; Day2; NLDM; Aluminum chloride 1mM
+0.0
+0.2
-0.4
+0.2
-0.2
biofilm assay; planktonic sample
Planktonic; Day4; SGW; pH7
-0.0
+0.2
+0.4
+0.2
-0.7
biofilm assay; biofilm sample
biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
+0.1
-0.1
+0.5
-0.0
-0.2
anaerobic
Anaerobic, acetate donor; nitrate and iron electron acceptors
-0.1
+0.5
-0.1
+0.1
-0.2
phage
4B-T2
+0.2
-0.2
-0.1
+0.2
+0.3
no phage control
No phage control
+0.1
-0.2
+0.4
+0.1
+0.1
biofilm assay; biofilm sample
biofilm; Day2; NLDM; Aluminum chloride 1mM
-0.1
+0.2
+0.6
-0.0
-0.2
stress
R2A with silver chloride 1 mM
-0.0
+0.3
+0.6
-0.1
-0.1
phage
4B-T1
+0.3
+0.2
+0.3
-0.1
-0.0
phage
1B-T1
+0.2
+0.2
+0.3
+0.2
+0.1
biofilm assay; biofilm sample
biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
+0.1
+0.3
+0.8
+0.1
+0.1
remove
LRK54_RS13250
plot
remove
LRK54_RS13255
plot
remove
LRK54_RS13260
remove
LRK54_RS13265
plot
remove
LRK54_RS13270
plot