Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS12995 and LRK54_RS13000 are separated by 74 nucleotidesLRK54_RS13000 and LRK54_RS13005 are separated by 114 nucleotidesLRK54_RS13005 and LRK54_RS13010 are separated by 144 nucleotidesLRK54_RS13010 and LRK54_RS13015 are separated by 94 nucleotides LRK54_RS12995: LRK54_RS12995 - MGMT family protein, at 2,901,773 to 2,902,114 _RS12995 LRK54_RS13000: LRK54_RS13000 - DNA helicase RecQ, at 2,902,189 to 2,904,018 _RS13000 LRK54_RS13005: LRK54_RS13005 - sugar porter family MFS transporter, at 2,904,133 to 2,905,557 _RS13005 LRK54_RS13010: LRK54_RS13010 - LacI family DNA-binding transcriptional regulator, at 2,905,702 to 2,906,724 _RS13010 LRK54_RS13015: LRK54_RS13015 - EAL domain-containing protein, at 2,906,819 to 2,909,317 _RS13015
Group Condition LRK54_RS12995 LRK54_RS13000 LRK54_RS13005 LRK54_RS13010 LRK54_RS13015
stress R2A with chromate 0.0048828125 mM -1.7 +0.1 +0.0 -0.6 -0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; -2.1 -0.1 +0.4 +0.5 +0.2
carbon source D-Glucose (C) and 20 AA mix; 30C +0.9 +0.3 -1.3 -1.0 +0.0
carbon source D-Glucose (C) and 20 AA mix; 20C +1.2 +0.1 -1.0 -0.9 +0.1
r2a_control R2A control -1.4 -0.2 +0.6 +1.1 +0.1
stress R2A with sulfate 250 mM -1.1 -0.1 +0.6 +1.0 -0.1
stress R2A with Barium chloride 1.25 mM -0.9 -0.4 +0.9 +1.3 -0.2
stress R2A with Calcium chloride 125 mM -1.0 -0.3 +0.8 +1.2 -0.0
stress R2A with Nickel (II) chloride 0.3125 mM -1.0 -0.1 +0.9 +0.9 +0.2
stress R2A with silver chloride 1 mM -0.5 -0.4 +0.7 +1.1 -0.0
stress R2A with Barium chloride 1.25 mM -1.0 -0.1 +0.9 +1.2 -0.1
stress R2A with Magnesium sulfate 3.90625 mM -0.6 -0.2 +0.7 +1.2 -0.0
stress R2A with nitrite 25 mM -1.1 +0.2 +1.2 +1.1 +0.0
stress R2A with Calcium chloride 125 mM -0.6 -0.1 +0.8 +1.2 +0.1
stress R2A with bismuth(III) chloride 0.03125 mM -0.3 -0.3 +0.8 +1.5 -0.0
stress R2A with selenate 31.25 mM -0.5 -0.3 +1.3 +1.5 -0.1
stress R2A with selenate 31.25 mM -0.4 -0.1 +1.0 +1.3 +0.1
stress R2A with nitrite 50 mM -1.2 -0.1 +1.7 +1.5 -0.1
stress R2A with Cesium chloride 3.90625 mM -0.2 -0.2 +0.9 +1.4 -0.0
stress R2A with Chloride 250 mM +0.2 -0.2 +0.7 +1.3 -0.1
stress R2A with Calcium chloride 250 mM +0.4 -0.2 +0.8 +1.2 +0.0
stress R2A with SpecU metal mix 1 X +0.3 -0.1 +1.0 +1.2 -0.1
stress R2A with Cesium chloride 3.90625 mM +0.4 -0.2 +0.9 +1.4 -0.1
stress R2A with SpecU metal mix 1 X +0.2 -0.1 +1.1 +1.3 +0.0
stress R2A with Nickel (II) chloride 0.3125 mM +0.4 +0.0 +1.6 +1.1 +0.1
stress R2A with nitrite 50 mM -0.0 +0.0 +1.8 +1.5 +0.1
carbon source a-Cyclodextrin 20 mM -0.6 +0.0 +1.6 +2.6 -0.0
stress R2A with Cobalt chloride 0.15625 mM -0.7 +0.3 +2.2 +1.7 +0.4
carbon source a-Cyclodextrin 20 mM -0.7 +0.0 +1.5 +3.5 -0.0
stress R2A with Cobalt chloride 0.15625 mM +0.6 +0.2 +2.2 +1.6 +0.1
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