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Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS12860 and LRK54_RS12865 are separated by 4 nucleotides
LRK54_RS12865 and LRK54_RS12870 are separated by 197 nucleotides
LRK54_RS12870 and LRK54_RS12875 are separated by 150 nucleotides
LRK54_RS12875 and LRK54_RS12880 are separated by 96 nucleotides
LRK54_RS12860: LRK54_RS12860 - RNase adapter RapZ, at 2,877,277 to 2,878,182
_RS12860
LRK54_RS12865: LRK54_RS12865 - HPr(Ser) kinase/phosphatase, at 2,878,187 to 2,879,104
_RS12865
LRK54_RS12870: LRK54_RS12870 - ribosome-associated translation inhibitor RaiA, at 2,879,302 to 2,879,625
_RS12870
LRK54_RS12875: LRK54_RS12875 - RNA polymerase factor sigma-54, at 2,879,776 to 2,881,239
_RS12875
LRK54_RS12880: LRK54_RS12880 - LPS export ABC transporter ATP-binding protein, at 2,881,336 to 2,882,055
_RS12880
Group
Condition
LRK54
_RS12860
LRK54
_RS12865
LRK54
_RS12870
LRK54
_RS12875
LRK54
_RS12880
stress
R2A with bismuth(III) chloride 0.03125 mM
-3.2
-2.9
+0.0
-2.4
N.D.
stress
R2A with Magnesium sulfate 3.90625 mM
-3.4
-3.0
+0.1
-1.7
N.D.
stress
R2A with Cesium chloride 3.90625 mM
-3.3
-2.5
+0.0
-2.3
N.D.
stress
R2A with Manganese (II) chloride tetrahydrate 6.25 mM
-2.7
-2.5
-0.3
-2.5
N.D.
stress
R2A with sodium bromide 250 mM
-3.6
-3.1
-0.1
-1.3
N.D.
stress
R2A with Manganese (II) chloride tetrahydrate 0.625 mM
-3.9
-2.7
-0.9
-0.5
N.D.
stress
R2A with Cesium chloride 3.90625 mM
-3.0
-2.8
+0.1
-2.2
N.D.
stress
R2A with Magnesium sulfate 3.90625 mM
-3.3
-3.0
+0.1
-1.6
N.D.
stress
R2A with Manganese (II) chloride tetrahydrate 3.125 mM
-3.4
-2.7
-0.1
-1.4
N.D.
stress
R2A with ammonium iron(II) sulfate 2.5 mM
-3.0
-2.7
+0.1
-2.0
N.D.
r2a_control
R2A control
-3.6
-2.8
+0.0
-1.1
N.D.
stress
R2A with Nickel (II) chloride 0.3125 mM
-2.6
-3.1
-2.3
+0.7
N.D.
r2a_control
R2A control
-4.1
-2.9
-0.6
+0.4
N.D.
r2a_control
R2A control
-4.0
-2.9
-0.7
+0.5
N.D.
stress
R2A with Manganese (II) chloride tetrahydrate 0.15625 mM
-3.9
-2.7
-0.7
+0.2
N.D.
r2a_control
R2A control
-3.5
-3.2
-0.7
+0.5
N.D.
r2a_control
R2A control
-3.8
-2.8
-0.7
+0.4
N.D.
r2a_control
R2A control
-3.6
-2.9
-0.7
+0.5
N.D.
r2a_control
R2A control
-3.5
-3.0
-0.6
+0.4
N.D.
r2a_control
R2A control
-3.7
-2.9
-0.7
+0.7
N.D.
r2a_control
R2A control
-4.0
-2.5
-0.6
+0.5
N.D.
r2a_control
R2A control
-3.6
-2.9
-0.6
+0.6
N.D.
r2a_control
R2A control
-3.9
-2.6
-0.6
+0.6
N.D.
r2a_control
R2A control
-3.6
-2.9
-0.7
+0.7
N.D.
stress
R2A with Zinc chloride 0.625 mM
-3.4
-3.0
-0.3
+1.1
N.D.
stress
R2A with nitrite 25 mM
-3.2
-3.0
-0.3
+1.5
N.D.
stress
R2A with m-arsenite 0.078125 mM
-3.2
-2.8
-0.4
+2.1
N.D.
stress
R2A with m-arsenite 0.078125 mM
-3.1
-2.7
-0.4
+2.1
N.D.
stress
R2A with Nickel (II) chloride 0.3125 mM
-1.6
-2.2
-0.9
+3.2
N.D.
stress
R2A with Aluminum chloride 3.125 mM
-2.1
+2.6
-0.4
+2.8
N.D.
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