Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 314 experiments or choose conditions or try the comparative fitness browser

500 ntLRK54_RS12780 and LRK54_RS12785 are separated by 383 nucleotidesLRK54_RS12785 and LRK54_RS12790 are separated by 26 nucleotidesLRK54_RS12790 and LRK54_RS12795 are separated by 124 nucleotidesLRK54_RS12795 and LRK54_RS12800 are separated by 33 nucleotides LRK54_RS12780: LRK54_RS12780 - metal/formaldehyde-sensitive transcriptional repressor, at 2,863,648 to 2,863,917 _RS12780 LRK54_RS12785: LRK54_RS12785 - methyltransferase domain-containing protein, at 2,864,301 to 2,865,050 _RS12785 LRK54_RS12790: LRK54_RS12790 - LysR family transcriptional regulator, at 2,865,077 to 2,865,994 _RS12790 LRK54_RS12795: LRK54_RS12795 - NAD(P)-binding domain-containing protein, at 2,866,119 to 2,866,751 _RS12795 LRK54_RS12800: LRK54_RS12800 - DoxX family protein, at 2,866,785 to 2,867,174 _RS12800
Group Condition LRK54_RS12780 LRK54_RS12785 LRK54_RS12790 LRK54_RS12795 LRK54_RS12800
stress R2A with Cobalt chloride 0.15625 mM N.D. -1.0 -0.6 -0.1 -0.4
stress R2A with Cobalt chloride 0.15625 mM N.D. -0.7 -0.4 -0.2 -0.5
stress R2A with Cobalt chloride 0.078125 mM N.D. -0.3 -0.2 -0.4 -0.2
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 N.D. -0.3 -0.2 -0.0 -0.6
stress R2A_PIPES with Cobalt chloride 256 uM N.D. -0.3 +0.1 -0.6 -0.2
stress R2A with Cobalt chloride 0.078125 mM N.D. -0.4 -0.3 -0.1 -0.2
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 N.D. -0.3 +0.2 -0.3 -0.4
stress R2A with Selective_ion_mix_1 1 X N.D. -0.4 -0.0 -0.2 -0.1
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM N.D. +0.1 -0.2 -0.5 +0.0
stress R2A_PIPES with Nickel (II) chloride 424 uM N.D. +0.2 -0.0 -0.2 -0.3
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors N.D. +0.4 +0.0 -0.5 -0.0
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. +0.2 -0.2 +0.3 -0.3
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM N.D. +0.1 -0.2 -0.2 +0.3
stress R2A with bismuth(III) chloride 0.03125 mM N.D. +0.4 -0.0 +0.2 -0.4
stress R2A with lithium chloride 15.625 mM N.D. +0.2 +0.0 -0.2 +0.3
phage 4B-T2 N.D. +0.2 -0.2 +0.0 +0.3
phage 4E-T2 N.D. +0.0 +0.3 -0.2 +0.2
phage S3-T2 N.D. +0.2 -0.1 -0.1 +0.4
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM N.D. +0.3 -0.2 -0.0 +0.3
carbon source a-Cyclodextrin 20 mM N.D. +0.4 -0.2 +0.3 -0.1
stress R2A with silver chloride 1 mM N.D. +0.3 +0.2 -0.5 +0.4
r2a_control R2A control N.D. +0.4 +0.1 -0.3 +0.3
phage 1E-T1 N.D. +0.4 +0.3 -0.0 -0.1
carbon source acetate 20 mM N.D. -0.1 +0.2 +0.3 +0.2
r2a_control R2A control N.D. +0.2 +0.3 -0.0 +0.2
stress R2A with Calcium chloride 250 mM N.D. +0.2 +0.2 -0.0 +0.3
r2a_control R2A control N.D. +0.3 +0.1 +0.1 +0.3
stress R2A with Magnesium sulfate 3.90625 mM N.D. +0.2 +0.2 -0.0 +0.3
stress R2A with sodium bromide 250 mM N.D. +0.4 +0.1 -0.0 +0.3
stress R2A with bismuth(III) chloride 0.03125 mM N.D. +0.4 +0.2 -0.0 +0.3
remove
LRK54_RS12780
plot		 remove
LRK54_RS12785
plot		 remove
LRK54_RS12790		 remove
LRK54_RS12795
plot		 remove
LRK54_RS12800
plot