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Cofit
Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS12575 and LRK54_RS12580 are separated by 146 nucleotides
LRK54_RS12580 and LRK54_RS12585 are separated by 600 nucleotides
LRK54_RS12585 and LRK54_RS12590 are separated by 58 nucleotides
LRK54_RS12590 and LRK54_RS12595 overlap by 4 nucleotides
LRK54_RS12575: LRK54_RS12575 - carboxymuconolactone decarboxylase family protein, at 2,806,185 to 2,807,240
_RS12575
LRK54_RS12580: LRK54_RS12580 - hypothetical protein, at 2,807,387 to 2,807,713
_RS12580
LRK54_RS12585: LRK54_RS12585 - hypothetical protein, at 2,808,314 to 2,808,582
_RS12585
LRK54_RS12590: LRK54_RS12590 - molybdopterin-dependent oxidoreductase, at 2,808,641 to 2,810,896
_RS12590
LRK54_RS12595: LRK54_RS12595 - (2Fe-2S)-binding protein, at 2,810,893 to 2,811,429
_RS12595
Group
Condition
LRK54
_RS12575
LRK54
_RS12580
LRK54
_RS12585
LRK54
_RS12590
LRK54
_RS12595
stress
R2A with Magnesium sulfate 3.90625 mM
-0.4
-3.5
-0.2
-3.4
-2.3
stress
R2A with Cesium chloride 3.90625 mM
-0.5
-3.1
-0.2
-3.1
-2.5
stress
R2A with silver chloride 1 mM
-0.6
-3.2
-0.3
-2.9
-2.4
stress
R2A with lithium chloride 15.625 mM
-0.2
-3.1
-0.3
-3.0
-2.6
r2a_control
R2A control
-0.3
-3.7
-0.2
-2.8
-2.0
stress
R2A with Magnesium sulfate 3.90625 mM
-0.3
-2.6
-0.3
-3.2
-2.5
stress
R2A with selenate 31.25 mM
-0.3
-3.1
-0.3
-2.9
-2.3
stress
R2A with Calcium chloride 250 mM
-0.3
-3.1
-0.3
-2.8
-2.3
stress
R2A with Uranyl acetate 2.5 mM
-0.7
-2.1
-0.3
-3.1
-2.6
stress
R2A with silver chloride 1 mM
-0.3
-3.2
-0.1
-2.7
-2.4
stress
R2A with Ferric chloride 1.5625 mM
-0.2
-2.7
-0.2
-3.1
-2.5
r2a_control
R2A control
-0.7
-2.2
-0.4
-3.0
-2.4
stress
R2A with sulfate 250 mM
-0.7
-2.1
-0.4
-3.0
-2.5
stress
R2A with Barium chloride 1.25 mM
-0.3
-3.1
-0.2
-2.8
-2.2
stress
R2A with sodium bromide 250 mM
-0.4
-2.1
-0.3
-3.1
-2.7
stress
R2A with Nickel (II) chloride 0.3125 mM
-0.7
-1.3
+0.0
-3.0
-3.4
stress
R2A with Chloride 250 mM
-0.4
-2.2
-0.2
-3.0
-2.7
stress
R2A with bismuth(III) chloride 0.03125 mM
-0.2
-3.0
+0.0
-3.2
-2.1
stress
R2A with Chloride 250 mM
-0.4
-2.2
-0.2
-3.2
-2.4
stress
R2A with Chloride 250 mM
-0.2
-2.8
-0.2
-3.0
-2.1
r2a_control
R2A control
-0.3
-1.6
-0.3
-2.8
-3.3
r2a_control
R2A control
-0.5
-2.5
-0.1
-2.8
-2.3
stress
R2A with sulfate 250 mM
-0.3
-2.4
-0.0
-2.8
-2.7
stress
R2A with ammonium iron(II) sulfate 2.5 mM
-0.3
-1.7
-0.3
-3.0
-2.7
r2a_control
R2A control
-0.2
-2.0
-0.1
-3.0
-2.8
stress
R2A with Strontium chloride 3.90625 mM
-0.4
-2.0
-0.2
-2.9
-2.5
r2a_control
R2A control
-0.2
-2.5
-0.3
-2.8
-2.3
stress
R2A with Cesium chloride 3.90625 mM
-0.6
-1.8
-0.2
-3.2
-2.2
stress
R2A with sodium bromide 250 mM
-0.4
-2.0
-0.1
-3.0
-2.3
stress
R2A with Aluminum chloride 3.125 mM
+0.0
-1.8
-0.2
-2.6
-3.2
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