Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS12535 and LRK54_RS12540 are separated by 226 nucleotidesLRK54_RS12540 and LRK54_RS12545 are separated by 487 nucleotidesLRK54_RS12545 and LRK54_RS12550 are separated by 764 nucleotidesLRK54_RS12550 and LRK54_RS12555 are separated by 75 nucleotides LRK54_RS12535: LRK54_RS12535 - hypothetical protein, at 2,797,519 to 2,797,914 _RS12535 LRK54_RS12540: LRK54_RS12540 - IS1182 family transposase, at 2,798,141 to 2,799,655 _RS12540 LRK54_RS12545: LRK54_RS12545 - IS1182 family transposase, at 2,800,143 to 2,801,657 _RS12545 LRK54_RS12550: LRK54_RS12550 - hypothetical protein, at 2,802,422 to 2,802,718 _RS12550 LRK54_RS12555: LRK54_RS12555 - transposase, at 2,802,794 to 2,803,150 _RS12555
Group Condition LRK54_RS12535 LRK54_RS12540 LRK54_RS12545 LRK54_RS12550 LRK54_RS12555
r2a_control R2A control -0.9 N.D. N.D. -0.5 N.D.
stress R2A with sulfate 250 mM -0.8 N.D. N.D. -0.6 N.D.
biofilm assay; biofilm sample biofilm; Day2; NLDM; -0.6 N.D. N.D. -0.7 N.D.
biofilm assay; planktonic sample planktonic; Day1; NLDM; -0.7 N.D. N.D. -0.6 N.D.
biofilm assay; biofilm sample biofilm; Day1; NLDM; -0.8 N.D. N.D. -0.4 N.D.
stress R2A with Calcium chloride 250 mM -0.6 N.D. N.D. -0.5 N.D.
stress R2A with Uranyl acetate 2.5 mM -0.6 N.D. N.D. -0.5 N.D.
biofilm assay; planktonic sample planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.7 N.D. N.D. -0.4 N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.6 N.D. N.D. -0.4 N.D.
no phage control No phage control -0.3 N.D. N.D. -0.7 N.D.
carbon source L-Glutamic 20 mM -0.7 N.D. N.D. -0.3 N.D.
stress R2A_PIPES with Cadmium chloride 16 uM -0.4 N.D. N.D. -0.6 N.D.
carbon source D-Trehalose 20 mM -0.7 N.D. N.D. -0.2 N.D.
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 -0.6 N.D. N.D. -0.4 N.D.
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -0.3 N.D. N.D. -0.6 N.D.
biofilm assay; biofilm sample biofilm; Day1; NLDM; -0.6 N.D. N.D. -0.4 N.D.
r2a_control R2A control -0.5 N.D. N.D. -0.4 N.D.
carbon source D-Glucose (C) and 20 AA mix; 30C -0.4 N.D. N.D. -0.6 N.D.
no stress control no stress control -0.7 N.D. N.D. -0.2 N.D.
stress R2A with bismuth(III) chloride 0.03125 mM -0.2 N.D. N.D. -0.7 N.D.
stress R2A with Manganese (II) chloride tetrahydrate 0.625 mM -0.4 N.D. N.D. -0.5 N.D.
stress R2A with ammonium iron(II) sulfate 2.5 mM -0.5 N.D. N.D. -0.3 N.D.
carbon source casaminos 2 mg/mL -0.6 N.D. N.D. -0.2 N.D.
carbon source pyruvate 20 mM -0.5 N.D. N.D. -0.3 N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.6 N.D. N.D. +0.3 N.D.
pH R2A pH6 +0.6 N.D. N.D. +0.3 N.D.
stress R2A with Manganese (II) chloride tetrahydrate 1.25 mM +0.6 N.D. N.D. +0.3 N.D.
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.4 N.D. N.D. +0.5 N.D.
stress R2A with Zinc chloride 0.625 mM +0.5 N.D. N.D. +0.5 N.D.
stress R2A with Selective_ion_mix_1 1 X +0.5 N.D. N.D. +0.5 N.D.
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