Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS12470 and LRK54_RS12475 overlap by 1 nucleotidesLRK54_RS12475 and LRK54_RS12480 overlap by 4 nucleotidesLRK54_RS12480 and LRK54_RS12485 overlap by 11 nucleotidesLRK54_RS12485 and LRK54_RS12490 overlap by 4 nucleotides LRK54_RS12470: LRK54_RS12470 - RDD family protein, at 2,782,097 to 2,782,615 _RS12470 LRK54_RS12475: LRK54_RS12475 - RDD family protein, at 2,782,615 to 2,783,295 _RS12475 LRK54_RS12480: LRK54_RS12480 - stage II sporulation protein M, at 2,783,292 to 2,784,269 _RS12480 LRK54_RS12485: LRK54_RS12485 - hypothetical protein, at 2,784,259 to 2,785,782 _RS12485 LRK54_RS12490: LRK54_RS12490 - hypothetical protein, at 2,785,779 to 2,786,888 _RS12490
Group Condition LRK54_RS12470 LRK54_RS12475 LRK54_RS12480 LRK54_RS12485 LRK54_RS12490
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 +0.0 -0.3 -0.5 -0.1 -1.0
stress R2A with Calcium chloride 250 mM -0.2 -0.3 -0.4 -0.3 -0.4
no stress control no stress control -0.1 -0.1 -0.2 -0.4 -0.7
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.2 -0.2 -0.4 -0.5 -0.3
stress R2A with Uranyl acetate 2.5 mM -0.2 -0.3 -0.3 -0.2 -0.4
r2a_control R2A control -0.0 -0.3 -0.3 -0.3 -0.5
r2a_control R2A control -0.2 -0.3 -0.2 -0.2 -0.4
biofilm assay; planktonic sample planktonic; Day1; NLDM; -0.1 +0.1 -0.4 -0.4 -0.5
stress R2A with sulfate 250 mM -0.1 -0.2 -0.4 -0.3 -0.3
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.2 -0.6 -0.2 -0.1 -0.4
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.4 -0.6 -0.0 -0.5 -0.0
phage 2A-T2 -0.2 +0.6 +0.2 -0.2 +0.2
phage phage 31.1 +0.3 +0.5 +0.2 -0.4 +0.3
stress R2A with chromate 0.0048828125 mM +0.2 -0.3 +0.1 +0.3 +0.5
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.5 +0.5 +0.1 +0.1 -0.4
stress R2A with Nickel (II) chloride 0.3125 mM +0.4 -0.1 +0.1 +0.3 +0.6
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 +0.8 +0.2 -0.0 +0.0 +0.3
r2a_control R2A control +0.3 +0.2 +0.3 +0.3 +0.1
stress R2A with Manganese (II) chloride tetrahydrate 1.25 mM +0.1 +0.2 +0.2 +0.4 +0.4
biofilm assay; planktonic sample planktonic; Day2; NLDM; +0.3 +0.3 +0.2 +0.3 +0.2
stress R2A with Cobalt chloride 0.15625 mM +0.3 +0.5 +0.1 +0.1 +0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.6 +0.3 +0.1 +0.1 +0.2
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM +0.2 +0.4 +0.2 +0.2 +0.2
pH R2A pH5 +0.2 +0.3 +0.3 +0.3 +0.3
stress R2A with Selective_ion_mix_1 1 X +0.1 +0.3 +0.4 +0.3 +0.3
stress R2A with Selective_ion_mix_1 1 X +0.3 +0.3 +0.3 +0.2 +0.5
carbon source a-Cyclodextrin 20 mM +0.5 +0.2 +0.2 +0.4 +0.3
stress R2A with Selective_ion_mix_1 1 X +0.4 +0.2 +0.2 +0.4 +0.5
stress R2A with Zinc chloride 0.625 mM +0.6 +0.4 +0.2 +0.2 +0.3
carbon source a-Cyclodextrin 20 mM +0.5 +0.4 +0.2 +0.3 +0.5
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