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Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS12365 and LRK54_RS12370 are separated by 1 nucleotides
LRK54_RS12370 and LRK54_RS12375 are separated by 95 nucleotides
LRK54_RS12375 and LRK54_RS12380 are separated by 102 nucleotides
LRK54_RS12380 and LRK54_RS12385 overlap by 4 nucleotides
LRK54_RS12365: LRK54_RS12365 - ATP-binding protein, at 2,753,861 to 2,757,403
_RS12365
LRK54_RS12370: LRK54_RS12370 - DNA polymerase III subunit chi, at 2,757,405 to 2,757,824
_RS12370
LRK54_RS12375: LRK54_RS12375 - leucyl aminopeptidase, at 2,757,920 to 2,759,410
_RS12375
LRK54_RS12380: LRK54_RS12380 - LPS export ABC transporter permease LptF, at 2,759,513 to 2,760,634
_RS12380
LRK54_RS12385: LRK54_RS12385 - LPS export ABC transporter permease LptG, at 2,760,631 to 2,761,731
_RS12385
Group
Condition
LRK54
_RS12365
LRK54
_RS12370
LRK54
_RS12375
LRK54
_RS12380
LRK54
_RS12385
stress
R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
-0.2
N.D.
-0.7
N.D.
N.D.
stress
R2A with Nickel (II) chloride 0.3125 mM
-0.1
N.D.
-0.8
N.D.
N.D.
stress
R2A with lithium chloride 15.625 mM
-0.0
N.D.
-0.8
N.D.
N.D.
stress
R2A with Magnesium sulfate 3.90625 mM
+0.0
N.D.
-0.8
N.D.
N.D.
stress
R2A with silver chloride 1 mM
-0.1
N.D.
-0.6
N.D.
N.D.
stress
R2A with mercury (II) chloride 0.009765625 mM
+0.0
N.D.
-0.7
N.D.
N.D.
stress
R2A with selenate 31.25 mM
-0.1
N.D.
-0.6
N.D.
N.D.
stress
R2A with lead(II) chloride 0.625 mM
-0.0
N.D.
-0.6
N.D.
N.D.
biofilm assay; planktonic sample
planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
+0.0
N.D.
-0.6
N.D.
N.D.
stress
R2A with Chloride 250 mM
+0.1
N.D.
-0.7
N.D.
N.D.
r2a_control
R2A control
+0.0
N.D.
-0.6
N.D.
N.D.
stress
R2A with Barium chloride 1.25 mM
+0.1
N.D.
-0.7
N.D.
N.D.
stress
R2A with Chloride 250 mM
+0.1
N.D.
-0.7
N.D.
N.D.
stress
R2A with selenate 31.25 mM
+0.0
N.D.
-0.6
N.D.
N.D.
r2a_control
R2A control
+0.1
N.D.
-0.7
N.D.
N.D.
stress
R2A with Barium chloride 1.25 mM
+0.1
N.D.
-0.7
N.D.
N.D.
stress
R2A with Uranyl acetate 2.5 mM
+0.0
N.D.
-0.6
N.D.
N.D.
r2a_control
R2A control
+0.1
N.D.
-0.7
N.D.
N.D.
stress
R2A with Chloride 250 mM
+0.1
N.D.
-0.6
N.D.
N.D.
stress
R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM
+0.1
N.D.
-0.6
N.D.
N.D.
stress
R2A with Calcium chloride 125 mM
+0.1
N.D.
-0.6
N.D.
N.D.
stress
R2A with Calcium chloride 250 mM
+0.2
N.D.
-0.7
N.D.
N.D.
stress
R2A with Chloride 250 mM
+0.1
N.D.
-0.6
N.D.
N.D.
r2a_control
R2A control
+0.1
N.D.
-0.6
N.D.
N.D.
stress
R2A with Strontium chloride 3.90625 mM
+0.1
N.D.
-0.6
N.D.
N.D.
stress
R2A with bismuth(III) chloride 0.03125 mM
+0.4
N.D.
-0.8
N.D.
N.D.
stress
R2A with Uranyl acetate 2.5 mM
+0.1
N.D.
-0.6
N.D.
N.D.
stress
R2A with Magnesium sulfate 3.90625 mM
+0.1
N.D.
-0.5
N.D.
N.D.
stress
R2A with chromate 0.0048828125 mM
-0.1
N.D.
+0.7
N.D.
N.D.
stress
R2A with chromate 0.0048828125 mM
+0.2
N.D.
+0.5
N.D.
N.D.
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