Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS12165 and LRK54_RS12170 are separated by 107 nucleotidesLRK54_RS12170 and LRK54_RS12175 are separated by 62 nucleotidesLRK54_RS12175 and LRK54_RS12180 are separated by 73 nucleotidesLRK54_RS12180 and LRK54_RS12185 overlap by 1 nucleotides LRK54_RS12165: LRK54_RS12165 - nucleoside permease, at 2,706,265 to 2,707,545 _RS12165 LRK54_RS12170: LRK54_RS12170 - uracil-DNA glycosylase family protein, at 2,707,653 to 2,708,237 _RS12170 LRK54_RS12175: LRK54_RS12175 - FAD-binding protein, at 2,708,300 to 2,709,673 _RS12175 LRK54_RS12180: LRK54_RS12180 - YraN family protein, at 2,709,747 to 2,710,103 _RS12180 LRK54_RS12185: LRK54_RS12185 - penicillin-binding protein activator, at 2,710,103 to 2,712,037 _RS12185
Group Condition LRK54_RS12165 LRK54_RS12170 LRK54_RS12175 LRK54_RS12180 LRK54_RS12185
carbon source a-Cyclodextrin 20 mM -0.6 -0.2 -0.2 -0.7 -2.0
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.2 -1.0 -0.9 -0.4 -1.3
carbon source a-Cyclodextrin 20 mM -0.4 -0.3 +0.1 -0.0 -2.7
stress R2A with SpecU metal mix 1 X +0.4 -0.1 +0.0 +0.1 -3.6
stress R2A with SpecU metal mix 1 X +0.5 -0.0 -0.1 +0.2 -3.2
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM +1.5 -0.1 -0.3 -0.0 -2.9
anaerobic Anaerobic, acetate donor; nitrate electron acceptor +0.1 +0.1 -1.7 -0.3 -0.1
stress R2A with nitrate 250 mM +1.0 +0.0 -0.4 +0.0 -2.3
stress R2A with Aluminum chloride 3.125 mM +1.5 -0.0 -0.4 +0.0 -2.7
stress R2A with Aluminum chloride 3.125 mM +1.2 +0.0 -0.4 -0.3 -2.2
pH R2A_PIPES pH 4 +0.5 +0.1 -0.2 -0.2 -1.6
pH R2A_PIPES pH 4 +0.6 -0.0 +0.1 -0.1 -1.8
stress R2A with arsenate 31.25 mM +0.6 +0.3 -0.4 -0.2 -1.2
stress R2A with nitrate 250 mM +1.0 +0.3 -0.0 -0.0 -2.1
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM +1.6 +0.4 +0.1 -0.1 -2.7
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM +1.5 +0.0 +0.1 +0.1 -2.1
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM +1.6 -0.0 +0.2 -0.1 -1.6
stress R2A with lithium chloride 15.625 mM +1.0 +0.2 -1.2 -0.2 +0.4
stress R2A with m-arsenite 0.078125 mM +1.3 -0.1 -0.5 +0.2 -0.2
stress R2A with Calcium chloride 250 mM +2.4 +0.3 +0.2 -0.2 -2.0
stress R2A with Manganese (II) chloride tetrahydrate 2.5 mM +1.3 -0.1 +0.6 -0.3 -0.2
stress R2A with Calcium chloride 125 mM +1.4 +0.0 +0.5 -0.0 -0.5
stress R2A with Calcium chloride 250 mM +1.4 +0.2 +0.2 +0.2 -0.6
stress R2A with bismuth(III) chloride 0.03125 mM +0.8 +0.3 +1.1 +0.3 -1.1
stress R2A with Cesium chloride 3.90625 mM +1.7 +0.0 -0.4 +0.0 +0.5
stress R2A with nitrite 50 mM +1.4 +0.2 +0.3 +0.3 +0.2
stress R2A with Cesium chloride 3.90625 mM +1.9 -0.0 +0.1 +0.2 +0.3
stress R2A with Nickel (II) chloride 0.3125 mM +2.6 -0.1 +0.2 +0.0 -0.0
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM +2.9 +0.3 +0.3 -0.3 -0.2
stress R2A with Nickel (II) chloride 0.3125 mM +5.7 +0.0 +1.2 -0.1 -0.0
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