Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS11945 and LRK54_RS11950 are separated by 88 nucleotidesLRK54_RS11950 and LRK54_RS11955 are separated by 179 nucleotidesLRK54_RS11955 and LRK54_RS11960 are separated by 42 nucleotidesLRK54_RS11960 and LRK54_RS11965 are separated by 78 nucleotides LRK54_RS11945: LRK54_RS11945 - ABC transporter permease, at 2,648,325 to 2,649,644 _RS11945 LRK54_RS11950: LRK54_RS11950 - TIGR00366 family protein, at 2,649,733 to 2,651,121 _RS11950 LRK54_RS11955: LRK54_RS11955 - drug/metabolite exporter YedA, at 2,651,301 to 2,652,227 _RS11955 LRK54_RS11960: LRK54_RS11960 - hypothetical protein, at 2,652,270 to 2,652,539 _RS11960 LRK54_RS11965: LRK54_RS11965 - Rieske 2Fe-2S domain-containing protein, at 2,652,618 to 2,652,986 _RS11965
Group Condition LRK54_RS11945 LRK54_RS11950 LRK54_RS11955 LRK54_RS11960 LRK54_RS11965
carbon source D-Glucose-6-Phosphate 20 mM -0.3 -0.1 -0.3 N.D. -0.6
stress R2A with chromate 0.0048828125 mM -0.1 -0.1 -0.2 N.D. -0.6
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x -0.1 -0.1 -0.0 N.D. -0.7
carbon source a-Cyclodextrin 20 mM +0.2 -0.0 -0.4 N.D. -0.5
stress R2A_PIPES with Nickel (II) chloride 424 uM -0.1 +0.1 +0.0 N.D. -0.8
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.1 +0.0 +0.1 N.D. -0.9
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 +0.4 -0.0 -0.1 N.D. -0.9
stress R2A with Nickel (II) chloride 0.3125 mM -0.5 +0.1 -0.4 N.D. +0.7
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 -0.3 +0.4 -0.1 N.D. -0.2
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.5 +0.1 +0.1 N.D. +0.3
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM -0.2 -0.3 -1.0 N.D. +1.6
stress R2A with Cobalt chloride 0.15625 mM -0.4 +0.1 -0.3 N.D. +0.7
stress R2A with lithium chloride 15.625 mM -0.2 +0.0 -0.4 N.D. +0.9
stress R2A with Strontium chloride 3.90625 mM +0.1 +0.1 -0.6 N.D. +0.8
stress R2A with Uranyl acetate 2.5 mM +0.0 +0.1 -0.3 N.D. +0.6
stress R2A with lithium chloride 15.625 mM -0.1 +0.0 -0.4 N.D. +1.0
stress R2A with Cesium chloride 3.90625 mM -0.1 +0.1 -0.1 N.D. +0.8
stress R2A with beryllium sulfate tetrahydrate 1.953125 mM +0.1 -0.1 -0.2 N.D. +0.9
stress R2A with beryllium sulfate tetrahydrate 1.953125 mM +0.0 +0.1 -0.2 N.D. +0.7
stress R2A with Barium chloride 1.25 mM +0.2 +0.1 -0.2 N.D. +0.5
stress R2A with Selective_ion_mix_1 1 X -0.3 +0.0 +0.1 N.D. +0.9
stress R2A with Cobalt chloride 0.15625 mM +0.0 +0.1 -0.2 N.D. +0.9
stress R2A with Selective_ion_mix_1 1 X +0.1 -0.0 +0.1 N.D. +0.8
stress R2A with Chloride 250 mM +0.1 -0.1 +0.3 N.D. +0.6
stress R2A with Chloride 250 mM -0.0 +0.1 +0.3 N.D. +0.5
stress R2A with silver chloride 1 mM +0.2 +0.1 -0.0 N.D. +0.8
stress R2A with Aluminum chloride 3.125 mM +0.4 +0.2 -0.3 N.D. +0.8
stress R2A with silver chloride 1 mM +0.2 -0.1 +0.0 N.D. +1.0
stress R2A with Selective_ion_mix_1 1 X +0.2 +0.2 +0.2 N.D. +0.6
stress R2A with Selective_ion_mix_1 1 X +0.3 +0.0 +0.2 N.D. +0.7
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