Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS11820 and LRK54_RS11825 are separated by 69 nucleotidesLRK54_RS11825 and LRK54_RS11830 are separated by 61 nucleotidesLRK54_RS11830 and LRK54_RS11835 are separated by 272 nucleotidesLRK54_RS11835 and LRK54_RS11840 overlap by 1 nucleotides LRK54_RS11820: LRK54_RS11820 - citrate synthase, at 2,618,733 to 2,620,028 _RS11820 LRK54_RS11825: LRK54_RS11825 - hypothetical protein, at 2,620,098 to 2,620,769 _RS11825 LRK54_RS11830: LRK54_RS11830 - penicillin-binding protein 1A, at 2,620,831 to 2,623,359 _RS11830 LRK54_RS11835: LRK54_RS11835 - pilus assembly protein PilM, at 2,623,632 to 2,624,690 _RS11835 LRK54_RS11840: LRK54_RS11840 - PilN domain-containing protein, at 2,624,690 to 2,625,415 _RS11840
Group Condition LRK54_RS11820 LRK54_RS11825 LRK54_RS11830 LRK54_RS11835 LRK54_RS11840
stress R2A with SpecU metal mix 1 X +0.1 +0.1 -3.7 -0.2 -0.0
stress R2A with SpecU metal mix 1 X +0.2 +0.1 -3.4 -0.2 -0.2
stress R2A with Calcium chloride 250 mM -0.2 -0.5 -2.4 +0.4 +0.5
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM -0.3 -0.3 -2.5 +0.7 +0.6
carbon source a-Cyclodextrin 20 mM +0.5 -1.1 -1.9 +1.0 +0.8
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM +0.3 -0.4 -1.9 +0.7 +0.6
carbon source a-Cyclodextrin 20 mM +0.4 -0.8 -1.4 +0.8 +0.6
stress R2A with Aluminum chloride 3.125 mM +0.7 -0.8 -1.3 +0.8 +0.7
pH R2A_PIPES pH 4 -0.4 -0.0 -1.2 +1.3 +1.3
pH R2A_PIPES pH 4 -0.4 +0.1 -1.1 +1.2 +1.3
anaerobic Anaerobic, acetate donor; nitrate electron acceptor -1.3 -0.4 -0.7 +1.8 +1.7
anaerobic Anaerobic, acetate donor; nitrate electron acceptor -0.9 -0.4 -0.3 +1.6 +1.6
carbon source acetate 20 mM -1.8 -0.0 -0.3 +2.2 +2.0
stress R2A with m-arsenite 0.078125 mM +2.1 +0.1 -1.2 +0.7 +0.7
carbon source acetate 20 mM -2.0 -0.1 -0.4 +2.4 +2.3
stress R2A with Ferric chloride 1.5625 mM -1.4 -0.0 -0.4 +2.2 +2.0
stress R2A with m-arsenite 0.078125 mM +2.1 +0.1 -1.2 +0.8 +0.7
carbon source D-Trehalose 20 mM -0.2 -0.5 -0.3 +1.9 +1.8
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM +1.5 -0.6 -0.2 +1.1 +1.0
stress R2A with ammonium iron(II) sulfate 2.5 mM -0.8 -0.1 -0.6 +2.2 +2.3
stress R2A with beryllium sulfate tetrahydrate 1.953125 mM +1.2 -0.2 -0.4 +1.2 +1.3
stress R2A with beryllium sulfate tetrahydrate 1.953125 mM +1.6 -0.2 -0.2 +1.1 +1.0
stress R2A with Aluminum chloride 3.125 mM +1.8 -0.1 -1.5 +1.7 +1.7
stress R2A with Manganese (II) chloride tetrahydrate 2.5 mM +0.9 -0.1 -0.2 +1.5 +1.6
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors -1.6 -0.3 -0.1 +2.9 +2.9
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors -0.9 -0.1 -0.9 +3.0 +2.9
stress R2A with Nickel (II) chloride 0.3125 mM +2.7 +0.4 +0.6 +0.7 +0.7
carbon source Gly-Glu 20 mM +2.5 -0.0 -0.1 +1.4 +1.5
phage phage 31.1 +5.0 +0.0 -0.1 +0.5 +0.5
carbon source Gly-Glu 20 mM +2.7 +0.0 -0.2 +1.8 +1.8
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