Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS11815 and LRK54_RS11820 are separated by 275 nucleotidesLRK54_RS11820 and LRK54_RS11825 are separated by 69 nucleotidesLRK54_RS11825 and LRK54_RS11830 are separated by 61 nucleotidesLRK54_RS11830 and LRK54_RS11835 are separated by 272 nucleotides LRK54_RS11815: LRK54_RS11815 - type B 50S ribosomal protein L31, at 2,618,203 to 2,618,457 _RS11815 LRK54_RS11820: LRK54_RS11820 - citrate synthase, at 2,618,733 to 2,620,028 _RS11820 LRK54_RS11825: LRK54_RS11825 - hypothetical protein, at 2,620,098 to 2,620,769 _RS11825 LRK54_RS11830: LRK54_RS11830 - penicillin-binding protein 1A, at 2,620,831 to 2,623,359 _RS11830 LRK54_RS11835: LRK54_RS11835 - pilus assembly protein PilM, at 2,623,632 to 2,624,690 _RS11835
Group Condition LRK54_RS11815 LRK54_RS11820 LRK54_RS11825 LRK54_RS11830 LRK54_RS11835
stress R2A with SpecU metal mix 1 X N.D. +0.1 +0.1 -3.7 -0.2
stress R2A with SpecU metal mix 1 X N.D. +0.2 +0.1 -3.4 -0.2
stress R2A with Calcium chloride 250 mM N.D. -0.2 -0.5 -2.4 +0.4
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM N.D. -0.3 -0.3 -2.5 +0.7
carbon source a-Cyclodextrin 20 mM N.D. +0.5 -1.1 -1.9 +1.0
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM N.D. +0.3 -0.4 -1.9 +0.7
carbon source a-Cyclodextrin 20 mM N.D. +0.4 -0.8 -1.4 +0.8
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM N.D. +0.7 -0.3 -1.7 +0.5
stress R2A with Aluminum chloride 3.125 mM N.D. +0.7 -0.8 -1.3 +0.8
anaerobic Anaerobic, acetate donor; nitrate electron acceptor N.D. -1.3 -0.4 -0.7 +1.8
pH R2A_PIPES pH 4 N.D. -0.4 -0.0 -1.2 +1.3
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM N.D. +1.1 -0.2 -1.4 +0.3
anaerobic Anaerobic, acetate donor; nitrate electron acceptor N.D. -0.9 -0.4 -0.3 +1.6
carbon source acetate 20 mM N.D. -2.0 -0.1 -0.4 +2.4
carbon source acetate 20 mM N.D. -1.8 -0.0 -0.3 +2.2
stress R2A with Ferric chloride 1.5625 mM N.D. -1.4 -0.0 -0.4 +2.2
stress R2A with ammonium iron(II) sulfate 2.5 mM N.D. -0.8 -0.1 -0.6 +2.2
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors N.D. -1.6 -0.3 -0.1 +2.9
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors N.D. -0.9 -0.1 -0.9 +3.0
stress R2A with m-arsenite 0.078125 mM N.D. +2.1 +0.1 -1.2 +0.7
stress R2A with m-arsenite 0.078125 mM N.D. +2.1 +0.1 -1.2 +0.8
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM N.D. +1.5 -0.6 -0.2 +1.1
stress R2A with Aluminum chloride 3.125 mM N.D. +1.8 -0.1 -1.5 +1.7
stress R2A with beryllium sulfate tetrahydrate 1.953125 mM N.D. +1.2 -0.2 -0.4 +1.2
stress R2A with beryllium sulfate tetrahydrate 1.953125 mM N.D. +1.6 -0.2 -0.2 +1.1
stress R2A with lithium chloride 15.625 mM N.D. +1.7 +0.3 -0.2 +0.8
carbon source Gly-Glu 20 mM N.D. +2.5 -0.0 -0.1 +1.4
stress R2A with Nickel (II) chloride 0.3125 mM N.D. +2.7 +0.4 +0.6 +0.7
carbon source Gly-Glu 20 mM N.D. +2.7 +0.0 -0.2 +1.8
phage phage 31.1 N.D. +5.0 +0.0 -0.1 +0.5
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