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Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS11710 and LRK54_RS11715 overlap by 4 nucleotides
LRK54_RS11715 and LRK54_RS11720 are separated by 195 nucleotides
LRK54_RS11720 and LRK54_RS11725 are separated by 160 nucleotides
LRK54_RS11725 and LRK54_RS11730 overlap by 4 nucleotides
LRK54_RS11710: LRK54_RS11710 - cytochrome ubiquinol oxidase subunit I, at 2,596,909 to 2,598,480
_RS11710
LRK54_RS11715: LRK54_RS11715 - hypothetical protein, at 2,598,477 to 2,598,707
_RS11715
LRK54_RS11720: LRK54_RS11720 - Xaa-Pro dipeptidase, at 2,598,903 to 2,600,219
_RS11720
LRK54_RS11725: LRK54_RS11725 - PilZ domain-containing protein, at 2,600,380 to 2,600,727
_RS11725
LRK54_RS11730: LRK54_RS11730 - DUF1631 family protein, at 2,600,724 to 2,603,018
_RS11730
Group
Condition
LRK54
_RS11710
LRK54
_RS11715
LRK54
_RS11720
LRK54
_RS11725
LRK54
_RS11730
stress
R2A with bismuth(III) chloride 0.03125 mM
-1.2
N.D.
-0.7
-4.6
+0.0
biofilm assay; planktonic sample
Planktonic; Day2; SGW; pH7
-0.5
N.D.
+0.0
-4.1
-0.5
stress
R2A with Barium chloride 1.25 mM
-3.1
N.D.
+0.1
-1.4
+0.2
r2a_control
R2A control
-3.6
N.D.
+0.1
-0.7
+0.1
stress
R2A with selenate 31.25 mM
-4.1
N.D.
+0.1
-0.2
+0.1
stress
R2A with Magnesium sulfate 3.90625 mM
-3.1
N.D.
+0.1
-0.9
-0.0
stress
R2A with Chloride 250 mM
-3.8
N.D.
-0.0
-0.1
+0.0
stress
R2A with mercury (II) chloride 0.009765625 mM
-3.6
N.D.
+0.3
-0.3
+0.0
r2a_control
R2A control
-3.9
N.D.
+0.2
+0.0
+0.0
r2a_control
R2A control
-3.6
N.D.
+0.0
-0.1
+0.0
stress
R2A with Magnesium sulfate 3.90625 mM
-3.6
N.D.
+0.1
-0.0
-0.1
stress
R2A with selenate 31.25 mM
-3.9
N.D.
+0.2
-0.0
+0.1
stress
R2A with Chloride 250 mM
-3.4
N.D.
+0.1
-0.0
-0.1
r2a_control
R2A control
-3.7
N.D.
+0.3
-0.0
+0.0
r2a_control
R2A control
-3.8
N.D.
+0.2
+0.2
+0.0
stress
R2A with silver chloride 1 mM
-3.4
N.D.
+0.2
-0.2
+0.1
r2a_control
R2A control
-3.6
N.D.
+0.0
+0.4
-0.0
r2a_control
R2A control
-3.7
N.D.
+0.1
+0.3
+0.1
r2a_control
R2A control
-3.5
N.D.
+0.1
+0.3
+0.1
stress
R2A with Strontium chloride 3.90625 mM
-3.8
N.D.
+0.1
+0.6
+0.0
stress
R2A with Barium chloride 1.25 mM
-3.3
N.D.
+0.0
+0.1
+0.1
stress
R2A with silver chloride 1 mM
-3.3
N.D.
+0.1
+0.2
+0.0
r2a_control
R2A control
-3.5
N.D.
+0.2
+0.4
+0.0
r2a_control
R2A control
-3.6
N.D.
+0.2
+0.4
+0.1
r2a_control
R2A control
-3.5
N.D.
+0.1
+0.5
+0.1
r2a_control
R2A control
-3.3
N.D.
+0.2
+0.3
+0.0
stress
R2A with Chloride 250 mM
-2.9
N.D.
-0.2
+1.0
-0.2
stress
R2A with Cesium chloride 3.90625 mM
-3.0
N.D.
+0.1
+0.7
+0.1
stress
R2A with Nickel (II) chloride 0.3125 mM
-3.0
N.D.
+0.1
+0.7
+0.1
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-2.3
N.D.
+0.0
+2.2
-0.1
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