Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS11590 and LRK54_RS11595 are separated by 82 nucleotidesLRK54_RS11595 and LRK54_RS11600 are separated by 129 nucleotidesLRK54_RS11600 and LRK54_RS11605 are separated by 57 nucleotidesLRK54_RS11605 and LRK54_RS11610 overlap by 4 nucleotides LRK54_RS11590: LRK54_RS11590 - adenosylmethionine decarboxylase, at 2,573,936 to 2,574,721 _RS11590 LRK54_RS11595: LRK54_RS11595 - 2OG-Fe(II) oxygenase, at 2,574,804 to 2,575,529 _RS11595 LRK54_RS11600: LRK54_RS11600 - response regulator transcription factor, at 2,575,659 to 2,576,309 _RS11600 LRK54_RS11605: LRK54_RS11605 - sensor histidine kinase, at 2,576,367 to 2,577,098 _RS11605 LRK54_RS11610: LRK54_RS11610 - serine/threonine-protein kinase, at 2,577,095 to 2,580,394 _RS11610
Group Condition LRK54_RS11590 LRK54_RS11595 LRK54_RS11600 LRK54_RS11605 LRK54_RS11610
phage 1C-T2 N.D. -0.0 -0.7 -0.7 +0.1
stress R2A with m-arsenite 0.078125 mM N.D. -0.3 -0.1 -0.7 -0.1
biofilm assay; planktonic sample planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM N.D. -0.2 -0.5 -0.5 -0.0
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. +0.3 -0.7 -0.7 -0.0
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM N.D. +0.1 -0.7 -0.5 +0.0
stress R2A with silver chloride 1 mM N.D. -0.2 -0.6 -0.1 -0.1
stress R2A with Selective_ion_mix_1 1 X N.D. -0.2 -0.6 -0.2 -0.0
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM N.D. +0.0 -0.2 -0.6 -0.0
phage 3E-T2 N.D. -0.3 -0.5 +0.1 -0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM N.D. +0.1 -0.5 -0.3 -0.1
stress R2A with chromate 0.0048828125 mM N.D. -0.8 +0.1 +0.1 -0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM N.D. +0.2 -0.2 -0.7 +0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; N.D. -0.4 +0.4 -0.7 +0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM N.D. -0.1 +0.2 -0.7 -0.0
phage 1A-T1 N.D. -0.5 -0.2 +0.2 +0.0
stress R2A with FW104 filtrate 0.5 X N.D. -0.2 +0.2 -0.3 -0.2
carbon source D-Glucose-6-Phosphate 20 mM N.D. -0.2 +0.2 -0.5 +0.1
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 N.D. +0.3 -0.7 +0.1 -0.1
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors N.D. +0.2 +0.2 -0.7 +0.1
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM N.D. -0.2 +0.6 -0.6 +0.0
stress R2A with Cobalt chloride 0.15625 mM N.D. +0.4 -0.2 +0.1 -0.2
no stress control no stress control N.D. +0.2 +0.3 -0.4 -0.0
biofilm assay; biofilm sample biofilm; Day1; NLDM; N.D. -0.0 +0.6 -0.3 -0.1
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM N.D. -0.3 +0.3 +0.2 -0.1
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM N.D. -0.2 +0.5 +0.1 -0.2
stress R2A with chromate 0.0048828125 mM N.D. -0.3 +0.7 +0.4 -0.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; N.D. +0.3 +0.4 -0.2 +0.0
phage 1D-T2 N.D. +0.3 +0.2 +0.5 +0.1
no stress control no stress control N.D. +0.2 +0.3 +0.3 +0.2
stress R2A with bismuth(III) chloride 0.03125 mM N.D. +0.9 +0.8 +0.3 +0.1
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