Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS11380 and LRK54_RS11385 overlap by 4 nucleotidesLRK54_RS11385 and LRK54_RS11390 are separated by 115 nucleotidesLRK54_RS11390 and LRK54_RS11395 are separated by 885 nucleotidesLRK54_RS11395 and LRK54_RS11400 overlap by 4 nucleotides LRK54_RS11380: LRK54_RS11380 - c-type cytochrome, at 2,521,771 to 2,522,079 _RS11380 LRK54_RS11385: LRK54_RS11385 - co-chaperone DjlA, at 2,522,076 to 2,522,882 _RS11385 LRK54_RS11390: LRK54_RS11390 - ribulose-phosphate 3-epimerase, at 2,522,998 to 2,523,666 _RS11390 LRK54_RS11395: LRK54_RS11395 - proteobacterial dedicated sortase system response regulator, at 2,524,552 to 2,525,241 _RS11395 LRK54_RS11400: LRK54_RS11400 - hypothetical protein, at 2,525,238 to 2,525,819 _RS11400
Group Condition LRK54_RS11380 LRK54_RS11385 LRK54_RS11390 LRK54_RS11395 LRK54_RS11400
stress R2A with SpecU metal mix 1 X -0.5 -1.1 N.D. -3.7 -0.1
stress R2A with SpecU metal mix 1 X -0.1 -1.2 N.D. -2.6 -0.0
r2a_control R2A control -0.3 -3.5 N.D. -0.1 +0.1
stress R2A with Nickel (II) chloride 0.3125 mM +0.4 -4.0 N.D. -0.1 -0.0
r2a_control R2A control -0.2 -3.3 N.D. -0.3 -0.0
stress R2A with nitrate 125 mM -0.6 -3.1 N.D. +0.0 -0.0
stress R2A with Calcium chloride 250 mM -0.1 -3.4 N.D. -0.2 +0.2
r2a_control R2A control -0.2 -3.3 N.D. -0.0 +0.0
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM -0.3 -2.1 N.D. -0.9 -0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.6 -1.9 N.D. -1.0 +0.0
stress R2A with ammonium iron(II) sulfate 2.5 mM -0.2 -3.3 N.D. -0.1 +0.1
stress R2A with sodium bromide 250 mM -0.2 -3.3 N.D. +0.1 +0.1
stress R2A with mercury (II) chloride 0.009765625 mM -0.3 -3.3 N.D. -0.0 +0.2
stress R2A with sodium bromide 250 mM +0.1 -3.4 N.D. -0.2 +0.2
stress R2A with Manganese (II) chloride tetrahydrate 0.625 mM -0.3 -3.0 N.D. -0.1 +0.1
stress R2A with Magnesium sulfate 3.90625 mM +0.1 -3.3 N.D. -0.1 +0.1
stress R2A with lead(II) chloride 0.625 mM +0.4 -3.6 N.D. -0.1 +0.1
stress R2A with Magnesium sulfate 3.90625 mM +0.4 -3.6 N.D. -0.2 +0.3
stress R2A with Ferric chloride 1.5625 mM +0.1 -3.3 N.D. +0.1 +0.2
stress R2A with sulfate 250 mM +0.2 -3.2 N.D. +0.0 +0.1
stress R2A with lithium chloride 15.625 mM +0.3 -3.2 N.D. -0.2 +0.2
stress R2A with Chloride 250 mM +0.2 -3.3 N.D. -0.1 +0.2
stress R2A with Uranyl acetate 2.5 mM -0.1 -3.2 N.D. +0.2 +0.2
r2a_control R2A control +0.2 -3.2 N.D. +0.0 +0.1
stress R2A with Cesium chloride 3.90625 mM +0.2 -3.2 N.D. +0.0 +0.2
stress R2A with lithium chloride 15.625 mM +0.5 -3.0 N.D. -0.3 +0.1
stress R2A with Chloride 250 mM +0.3 -3.3 N.D. +0.1 +0.2
stress R2A with Chloride 250 mM +0.3 -3.1 N.D. +0.0 +0.2
stress R2A with lead(II) chloride 0.625 mM +0.2 -3.0 N.D. -0.0 +0.2
stress R2A with silver chloride 1 mM +0.3 -3.2 N.D. +0.1 +0.3
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