Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS11185 and LRK54_RS11190 are separated by 88 nucleotidesLRK54_RS11190 and LRK54_RS11195 are separated by 89 nucleotidesLRK54_RS11195 and LRK54_RS11200 are separated by 224 nucleotidesLRK54_RS11200 and LRK54_RS11205 are separated by 42 nucleotides LRK54_RS11185: LRK54_RS11185 - hypothetical protein, at 2,486,619 to 2,486,939 _RS11185 LRK54_RS11190: LRK54_RS11190 - glutathione S-transferase, at 2,487,028 to 2,487,696 _RS11190 LRK54_RS11195: LRK54_RS11195 - arginine deiminase-related protein, at 2,487,786 to 2,488,703 _RS11195 LRK54_RS11200: LRK54_RS11200 - DUF3247 family protein, at 2,488,928 to 2,489,230 _RS11200 LRK54_RS11205: LRK54_RS11205 - acyltransferase family protein, at 2,489,273 to 2,490,472 _RS11205
Group Condition LRK54_RS11185 LRK54_RS11190 LRK54_RS11195 LRK54_RS11200 LRK54_RS11205
biofilm assay; planktonic sample planktonic; Day1; NLDM; -0.6 -0.6 -0.7 N.D. -0.5
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.4 -0.6 -0.3 N.D. -0.5
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.3 -0.3 -0.6 N.D. -0.5
stress R2A_PIPES with Cadmium chloride 16 uM -0.4 -0.4 -0.4 N.D. -0.3
carbon source D-Trehalose 20 mM -0.6 -0.5 -0.2 N.D. -0.2
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 -0.7 -0.3 -0.2 N.D. -0.3
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -0.3 -0.3 -0.3 N.D. -0.2
r2a_control R2A control -0.3 -0.3 -0.1 N.D. -0.2
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.0 +0.0 -0.8 N.D. -0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.1 -0.6 +0.2 N.D. -0.4
phage 4B-T1 +0.2 +0.4 -0.4 N.D. -0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.4 -0.1 -0.3 N.D. +0.1
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.3 -0.3 +0.3 N.D. -0.0
stress R2A with FW104 filtrate 0.5 X +0.2 +0.3 +0.2 N.D. +0.2
stress R2A with copper (II) chloride 0.3125 mM +0.2 +0.2 +0.4 N.D. +0.2
stress R2A with Zinc chloride 0.3125 mM +0.3 +0.2 +0.4 N.D. +0.1
stress R2A with FW104 filtrate 0.5 X +0.2 +0.3 +0.3 N.D. +0.2
stress R2A with Nickel (II) chloride 0.3125 mM +0.3 +0.4 +0.1 N.D. +0.2
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM +0.2 +0.2 +0.4 N.D. +0.1
stress R2A with copper (II) chloride 0.3125 mM +0.4 +0.3 +0.2 N.D. +0.1
r2a_control R2A control +0.3 +0.3 +0.3 N.D. +0.1
pH R2A pH6 +0.2 +0.2 +0.3 N.D. +0.2
r2a_control R2A control +0.2 +0.2 +0.4 N.D. +0.2
r2a_control R2A control +0.2 +0.4 +0.2 N.D. +0.1
pH R2A pH6 +0.4 +0.0 +0.4 N.D. +0.2
stress R2A with Aluminum chloride 3.125 mM +0.2 +0.4 +0.2 N.D. +0.1
stress R2A with Cadmium chloride hemipentahydrate 0.0390625 mM +0.1 +0.4 +0.4 N.D. +0.2
r2a_control R2A control +0.2 +0.3 +0.4 N.D. +0.1
stress R2A with Aluminum chloride 3.125 mM +0.3 +0.3 +0.3 N.D. +0.1
r2a_control R2A control +0.2 +0.2 +0.5 N.D. +0.2
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