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Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS11090 and LRK54_RS11095 are separated by 11 nucleotides
LRK54_RS11095 and LRK54_RS11100 are separated by 88 nucleotides
LRK54_RS11100 and LRK54_RS11105 are separated by 9 nucleotides
LRK54_RS11105 and LRK54_RS11110 are separated by 246 nucleotides
LRK54_RS11090: LRK54_RS11090 - signal peptide peptidase SppA, at 2,458,060 to 2,459,940
_RS11090
LRK54_RS11095: LRK54_RS11095 - hypothetical protein, at 2,459,952 to 2,460,161
_RS11095
LRK54_RS11100: LRK54_RS11100 - SDR family oxidoreductase, at 2,460,250 to 2,461,032
_RS11100
LRK54_RS11105: LRK54_RS11105 - DegV family protein, at 2,461,042 to 2,461,980
_RS11105
LRK54_RS11110: LRK54_RS11110 - AMP nucleosidase, at 2,462,227 to 2,463,018
_RS11110
Group
Condition
LRK54
_RS11090
LRK54
_RS11095
LRK54
_RS11100
LRK54
_RS11105
LRK54
_RS11110
stress
R2A with bismuth(III) chloride 0.03125 mM
-0.7
N.D.
N.D.
-0.5
N.D.
stress
R2A with Magnesium sulfate 3.90625 mM
-0.7
N.D.
N.D.
-0.2
N.D.
stress
R2A with lithium chloride 15.625 mM
-0.5
N.D.
N.D.
-0.3
N.D.
stress
R2A with Nickel (II) chloride 0.3125 mM
-0.6
N.D.
N.D.
-0.1
N.D.
stress
R2A with Chloride 250 mM
-0.5
N.D.
N.D.
-0.2
N.D.
stress
R2A with nitrite 50 mM
-0.6
N.D.
N.D.
-0.2
N.D.
stress
R2A with Magnesium sulfate 3.90625 mM
-0.6
N.D.
N.D.
-0.1
N.D.
stress
R2A with Chloride 250 mM
-0.5
N.D.
N.D.
-0.2
N.D.
stress
R2A with Cesium chloride 3.90625 mM
-0.5
N.D.
N.D.
-0.1
N.D.
stress
R2A with lithium chloride 15.625 mM
-0.5
N.D.
N.D.
-0.1
N.D.
stress
R2A with nitrite 50 mM
-0.5
N.D.
N.D.
-0.1
N.D.
stress
R2A with sodium bromide 250 mM
-0.5
N.D.
N.D.
-0.1
N.D.
stress
R2A with selenate 31.25 mM
-0.5
N.D.
N.D.
-0.1
N.D.
biofilm assay; biofilm sample
biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
-0.2
N.D.
N.D.
-0.4
N.D.
stress
R2A with Cesium chloride 3.90625 mM
-0.5
N.D.
N.D.
-0.1
N.D.
stress
R2A with sodium bromide 250 mM
-0.4
N.D.
N.D.
-0.1
N.D.
stress
R2A with m-arsenite 0.078125 mM
-0.6
N.D.
N.D.
+0.1
N.D.
stress
R2A with m-arsenite 0.078125 mM
-0.5
N.D.
N.D.
+0.2
N.D.
stress
R2A with Nickel (II) chloride 0.3125 mM
-0.5
N.D.
N.D.
+0.2
N.D.
stress
R2A with silver chloride 1 mM
-0.4
N.D.
N.D.
+0.2
N.D.
stress
R2A with arsenate 31.25 mM
-0.4
N.D.
N.D.
+0.2
N.D.
stress
R2A with Calcium chloride 250 mM
-0.2
N.D.
N.D.
+0.4
N.D.
stress
R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM
-0.3
N.D.
N.D.
+0.7
N.D.
stress
R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM
-0.2
N.D.
N.D.
+0.9
N.D.
stress
R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
+0.1
N.D.
N.D.
+0.8
N.D.
carbon source
a-Cyclodextrin 20 mM
+0.8
N.D.
N.D.
+0.1
N.D.
stress
R2A with Manganese (II) chloride tetrahydrate 6.25 mM
+0.2
N.D.
N.D.
+0.7
N.D.
stress
R2A with Manganese (II) chloride tetrahydrate 6.25 mM
+0.2
N.D.
N.D.
+0.8
N.D.
stress
R2A with Calcium chloride 250 mM
+0.2
N.D.
N.D.
+0.9
N.D.
carbon source
a-Cyclodextrin 20 mM
+0.8
N.D.
N.D.
+0.4
N.D.
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