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Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS10895 and LRK54_RS10900 are separated by 749 nucleotides
LRK54_RS10900 and LRK54_RS10905 are separated by 6 nucleotides
LRK54_RS10905 and LRK54_RS10910 are separated by 218 nucleotides
LRK54_RS10910 and LRK54_RS10915 are separated by 187 nucleotides
LRK54_RS10895: LRK54_RS10895 - hypothetical protein, at 2,409,424 to 2,410,086
_RS10895
LRK54_RS10900: LRK54_RS10900 - dihydroorotase, at 2,410,836 to 2,411,888
_RS10900
LRK54_RS10905: LRK54_RS10905 - glutamate--cysteine ligase, at 2,411,895 to 2,413,262
_RS10905
LRK54_RS10910: LRK54_RS10910 - transcription termination factor Rho, at 2,413,481 to 2,415,280
_RS10910
LRK54_RS10915: LRK54_RS10915 - thioredoxin TrxA, at 2,415,468 to 2,415,794
_RS10915
Group
Condition
LRK54
_RS10895
LRK54
_RS10900
LRK54
_RS10905
LRK54
_RS10910
LRK54
_RS10915
stress
R2A with Nickel (II) chloride 0.3125 mM
-0.8
N.D.
N.D.
N.D.
N.D.
stress
R2A with bismuth(III) chloride 0.03125 mM
-0.7
N.D.
N.D.
N.D.
N.D.
biofilm assay; biofilm sample
biofilm; Day2; NLDM; Aluminum chloride 1mM
-0.5
N.D.
N.D.
N.D.
N.D.
stress
R2A with sulfate 250 mM
-0.5
N.D.
N.D.
N.D.
N.D.
phage
SA-T2
-0.5
N.D.
N.D.
N.D.
N.D.
r2a_control
R2A control
-0.5
N.D.
N.D.
N.D.
N.D.
phage
2B-T2
-0.5
N.D.
N.D.
N.D.
N.D.
r2a_control
R2A control
-0.4
N.D.
N.D.
N.D.
N.D.
r2a_control
R2A control
-0.4
N.D.
N.D.
N.D.
N.D.
stress
R2A with ammonium iron(II) sulfate 2.5 mM
-0.4
N.D.
N.D.
N.D.
N.D.
r2a_control
R2A control
-0.4
N.D.
N.D.
N.D.
N.D.
r2a_control
R2A control
-0.4
N.D.
N.D.
N.D.
N.D.
stress
R2A_PIPES with Aluminum chloride 1.125 mM
-0.4
N.D.
N.D.
N.D.
N.D.
stress
R2A with Cadmium chloride hemipentahydrate 0.01953125 mM
-0.4
N.D.
N.D.
N.D.
N.D.
biofilm assay; biofilm sample
biofilm; Day2; NLDM; Aluminum chloride 1mM
-0.4
N.D.
N.D.
N.D.
N.D.
phage
1C-T2
-0.4
N.D.
N.D.
N.D.
N.D.
phage
4E-T2
-0.4
N.D.
N.D.
N.D.
N.D.
stress
R2A with selenate 31.25 mM
-0.4
N.D.
N.D.
N.D.
N.D.
r2a_control
R2A control
-0.4
N.D.
N.D.
N.D.
N.D.
biofilm assay; planktonic sample
Planktonic; Day4; SGW; pH7
-0.4
N.D.
N.D.
N.D.
N.D.
stress
R2A with Chloride 250 mM
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
acetate 20 mM
-0.4
N.D.
N.D.
N.D.
N.D.
r2a_control
R2A control
-0.4
N.D.
N.D.
N.D.
N.D.
biofilm assay; planktonic sample
Planktonic; Day2; SGW; pH7
-0.4
N.D.
N.D.
N.D.
N.D.
stress
R2A with Calcium chloride 250 mM
-0.4
N.D.
N.D.
N.D.
N.D.
stress
R2A with Calcium chloride 250 mM
-0.4
N.D.
N.D.
N.D.
N.D.
r2a_control
R2A control
-0.4
N.D.
N.D.
N.D.
N.D.
stress
R2A with Uranyl acetate 2.5 mM
-0.4
N.D.
N.D.
N.D.
N.D.
stress
R2A with Barium chloride 1.25 mM
-0.4
N.D.
N.D.
N.D.
N.D.
r2a_control
R2A control
-0.4
N.D.
N.D.
N.D.
N.D.
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