Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 314 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
LRK54_RS10710 and LRK54_RS10715 are separated by 164 nucleotides
LRK54_RS10715 and LRK54_RS10720 are separated by 61 nucleotides
LRK54_RS10720 and LRK54_RS10725 overlap by 4 nucleotides
LRK54_RS10725 and LRK54_RS10730 are separated by 34 nucleotides
LRK54_RS10710: LRK54_RS10710 - M1 family metallopeptidase, at 2,368,489 to 2,370,345
_RS10710
LRK54_RS10715: LRK54_RS10715 - EAL domain-containing protein, at 2,370,510 to 2,372,690
_RS10715
LRK54_RS10720: LRK54_RS10720 - DUF2269 domain-containing protein, at 2,372,752 to 2,373,231
_RS10720
LRK54_RS10725: LRK54_RS10725 - NAD-dependent epimerase/dehydratase family protein, at 2,373,228 to 2,374,520
_RS10725
LRK54_RS10730: LRK54_RS10730 - prolyl aminopeptidase, at 2,374,555 to 2,375,508
_RS10730
Group
Condition
LRK54
_RS10710
LRK54
_RS10715
LRK54
_RS10720
LRK54
_RS10725
LRK54
_RS10730
biofilm assay; planktonic sample
planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
-0.2
-0.1
-0.5
-0.0
-0.2
carbon source
a-Cyclodextrin 20 mM
-0.2
-0.1
-0.2
-0.2
-0.3
phage
2E-T1
-0.0
-0.2
-0.2
-0.3
-0.2
stress
R2A with Selective_ion_mix_1 1 X
-0.1
-0.2
-0.3
-0.4
+0.1
phage
2A-T2
+0.2
-0.2
-0.4
-0.3
-0.2
biofilm assay; planktonic sample
Planktonic; Day2; SGW; pH7
-0.4
-0.3
-0.1
-0.2
+0.0
stress
R2A with Selective_ion_mix_1 1 X
-0.1
-0.2
-0.6
+0.3
-0.2
phage
4B-T2
+0.1
-0.1
-0.3
+0.1
-0.5
phage
2A-T1
-0.1
-0.2
-0.2
-0.2
-0.1
phage
2E-T2
-0.1
-0.2
-0.2
-0.1
-0.1
phage
1E-T2
-0.1
-0.2
+0.1
-0.2
-0.3
phage
1A-T1
+0.1
-0.2
-0.3
+0.0
-0.2
biofilm assay; planktonic sample
planktonic; Day2; NLDM; Aluminum chloride 1mM
-0.3
-0.1
-0.0
-0.3
+0.1
anaerobic
Anaerobic, acetate donor; nitrate and iron electron acceptors
-0.0
+0.1
-0.4
+0.0
-0.2
stress
R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
+0.1
-0.1
-0.0
-0.4
-0.1
biofilm assay; biofilm sample
biofilm; Day2; NLDM; Aluminum chloride 1mM
-0.2
-0.1
+0.2
-0.3
-0.0
biofilm assay; biofilm sample
biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
-0.0
-0.2
-0.5
-0.0
+0.2
stress
R2A with m-arsenite 0.078125 mM
-0.2
+0.1
+0.2
-0.2
-0.1
biofilm assay; biofilm sample
biofilm; Day2; NLDM;
-0.2
-0.2
+0.2
-0.3
+0.2
stress
R2A with Cobalt chloride 0.15625 mM
+0.0
-0.1
+0.2
+0.0
-0.5
stress
R2A with Nickel (II) chloride 0.625 mM
-0.3
-0.1
+0.2
+0.0
-0.1
stress
R2A with Nickel (II) chloride 0.3125 mM
-0.2
-0.2
+0.4
+0.1
-0.2
phage
1E-T1
+0.1
+0.1
-0.3
+0.2
-0.1
stress
R2A with Cesium chloride 3.90625 mM
+0.4
+0.1
-0.2
-0.1
-0.3
stress
R2A with chromate 0.0048828125 mM
+0.1
-0.2
+0.3
-0.2
+0.1
stress
R2A with silver chloride 1 mM
+0.1
+0.0
+0.3
+0.1
-0.3
carbon source
Gly-Glu 20 mM
-0.1
+0.1
+0.4
+0.1
-0.1
no stress control
no stress control
+0.1
+0.0
+0.6
+0.1
+0.1
pH
R2A_PIPES pH 4.25
+0.0
-0.0
+0.3
+0.3
+0.4
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.0
+0.1
+0.3
+0.3
+0.4
remove
LRK54_RS10710
plot
remove
LRK54_RS10715
plot
remove
LRK54_RS10720
remove
LRK54_RS10725
plot
remove
LRK54_RS10730
plot