Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS10710 and LRK54_RS10715 are separated by 164 nucleotidesLRK54_RS10715 and LRK54_RS10720 are separated by 61 nucleotidesLRK54_RS10720 and LRK54_RS10725 overlap by 4 nucleotidesLRK54_RS10725 and LRK54_RS10730 are separated by 34 nucleotides LRK54_RS10710: LRK54_RS10710 - M1 family metallopeptidase, at 2,368,489 to 2,370,345 _RS10710 LRK54_RS10715: LRK54_RS10715 - EAL domain-containing protein, at 2,370,510 to 2,372,690 _RS10715 LRK54_RS10720: LRK54_RS10720 - DUF2269 domain-containing protein, at 2,372,752 to 2,373,231 _RS10720 LRK54_RS10725: LRK54_RS10725 - NAD-dependent epimerase/dehydratase family protein, at 2,373,228 to 2,374,520 _RS10725 LRK54_RS10730: LRK54_RS10730 - prolyl aminopeptidase, at 2,374,555 to 2,375,508 _RS10730
Group Condition LRK54_RS10710 LRK54_RS10715 LRK54_RS10720 LRK54_RS10725 LRK54_RS10730
biofilm assay; planktonic sample planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.2 -0.1 -0.5 -0.0 -0.2
carbon source a-Cyclodextrin 20 mM -0.2 -0.1 -0.2 -0.2 -0.3
phage 2E-T1 -0.0 -0.2 -0.2 -0.3 -0.2
stress R2A with Selective_ion_mix_1 1 X -0.1 -0.2 -0.3 -0.4 +0.1
phage 2A-T2 +0.2 -0.2 -0.4 -0.3 -0.2
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 -0.4 -0.3 -0.1 -0.2 +0.0
stress R2A with Selective_ion_mix_1 1 X -0.1 -0.2 -0.6 +0.3 -0.2
phage 4B-T2 +0.1 -0.1 -0.3 +0.1 -0.5
phage 2A-T1 -0.1 -0.2 -0.2 -0.2 -0.1
phage 2E-T2 -0.1 -0.2 -0.2 -0.1 -0.1
phage 1E-T2 -0.1 -0.2 +0.1 -0.2 -0.3
phage 1A-T1 +0.1 -0.2 -0.3 +0.0 -0.2
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -0.3 -0.1 -0.0 -0.3 +0.1
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors -0.0 +0.1 -0.4 +0.0 -0.2
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM +0.1 -0.1 -0.0 -0.4 -0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.2 -0.1 +0.2 -0.3 -0.0
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.0 -0.2 -0.5 -0.0 +0.2
stress R2A with m-arsenite 0.078125 mM -0.2 +0.1 +0.2 -0.2 -0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; -0.2 -0.2 +0.2 -0.3 +0.2
stress R2A with Cobalt chloride 0.15625 mM +0.0 -0.1 +0.2 +0.0 -0.5
stress R2A with Nickel (II) chloride 0.625 mM -0.3 -0.1 +0.2 +0.0 -0.1
stress R2A with Nickel (II) chloride 0.3125 mM -0.2 -0.2 +0.4 +0.1 -0.2
phage 1E-T1 +0.1 +0.1 -0.3 +0.2 -0.1
stress R2A with Cesium chloride 3.90625 mM +0.4 +0.1 -0.2 -0.1 -0.3
stress R2A with chromate 0.0048828125 mM +0.1 -0.2 +0.3 -0.2 +0.1
stress R2A with silver chloride 1 mM +0.1 +0.0 +0.3 +0.1 -0.3
carbon source Gly-Glu 20 mM -0.1 +0.1 +0.4 +0.1 -0.1
no stress control no stress control +0.1 +0.0 +0.6 +0.1 +0.1
pH R2A_PIPES pH 4.25 +0.0 -0.0 +0.3 +0.3 +0.4
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x +0.0 +0.1 +0.3 +0.3 +0.4
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