Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 314 experiments or choose conditions or try the comparative fitness browser

500 ntLRK54_RS10570 and LRK54_RS10575 are separated by 149 nucleotidesLRK54_RS10575 and LRK54_RS10580 are separated by 71 nucleotidesLRK54_RS10580 and LRK54_RS10585 are separated by 102 nucleotidesLRK54_RS10585 and LRK54_RS10590 are separated by 140 nucleotides LRK54_RS10570: LRK54_RS10570 - accessory factor UbiK family protein, at 2,337,966 to 2,338,226 _RS10570 LRK54_RS10575: LRK54_RS10575 - YifB family Mg chelatase-like AAA ATPase, at 2,338,376 to 2,339,869 _RS10575 LRK54_RS10580: LRK54_RS10580 - sodium:proton antiporter, at 2,339,941 to 2,341,737 _RS10580 LRK54_RS10585: LRK54_RS10585 - isocitrate lyase, at 2,341,840 to 2,343,135 _RS10585 LRK54_RS10590: LRK54_RS10590 - malate synthase A, at 2,343,276 to 2,344,901 _RS10590
Group Condition LRK54_RS10570 LRK54_RS10575 LRK54_RS10580 LRK54_RS10585 LRK54_RS10590
carbon source acetate 20 mM +0.1 +0.1 -0.1 -4.2 -3.9
carbon source acetate 20 mM +0.6 -0.4 +0.1 -3.7 -3.4
anaerobic Anaerobic, acetate donor; nitrate electron acceptor +0.4 -0.1 +0.2 -2.0 -1.8
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors -0.8 +0.1 +0.2 -1.4 -1.4
anaerobic Anaerobic, acetate donor; nitrate electron acceptor -0.6 +0.1 -0.1 -1.2 -1.2
r2a_control R2A control -2.0 -0.4 -0.4 -0.0 +0.1
stress R2A with Nickel (II) chloride 0.3125 mM -2.0 +0.0 -0.4 -0.1 +0.0
phage 2F-T2 -1.5 -0.2 -0.6 -0.0 -0.1
stress R2A with bismuth(III) chloride 0.03125 mM -3.2 +0.6 +0.3 +0.2 -0.2
stress R2A with Chloride 250 mM -1.0 -0.2 -1.1 -0.1 -0.0
stress R2A with Cesium chloride 3.90625 mM -2.1 -0.1 -0.3 +0.1 +0.1
phage 2A-T2 -1.7 -0.3 -0.2 -0.1 -0.1
stress R2A with silver chloride 1 mM -2.2 -0.2 +0.0 -0.0 +0.2
r2a_control R2A control -2.1 +0.0 -0.3 +0.0 +0.2
stress R2A with silver chloride 1 mM -1.8 -0.3 -0.1 -0.0 +0.1
stress R2A with Strontium chloride 3.90625 mM -1.3 -0.6 -0.3 -0.0 +0.2
r2a_control R2A control -1.9 +0.0 -0.1 -0.1 +0.1
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM -2.5 +0.2 -0.1 -0.0 +0.5
r2a_control R2A control -1.9 -0.1 -0.2 +0.1 +0.2
r2a_control R2A control -1.8 +0.1 -0.2 +0.0 +0.1
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors -0.4 +0.3 -0.2 -1.2 -0.2
stress R2A with Calcium chloride 250 mM -1.3 -0.1 -0.6 -0.0 +0.5
stress R2A with chromate 0.0048828125 mM -1.7 -0.2 +0.4 -0.0 +0.0
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -1.8 +0.7 -0.2 -0.0 +0.0
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM -2.0 +0.3 +0.1 +0.0 +0.4
stress R2A_PIPES with Nickel (II) chloride 424 uM -1.2 +0.6 -0.3 -0.2 -0.0
stress R2A with Nickel (II) chloride 0.3125 mM -1.8 +0.4 +0.4 +0.2 -0.2
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x -1.5 +0.5 +0.3 -0.1 +0.1
stress R2A with Cobalt chloride 0.15625 mM -1.6 +0.7 +0.4 -0.2 +0.2
carbon source a-Cyclodextrin 20 mM +1.4 +1.1 -0.4 +0.1 +0.4
remove
LRK54_RS10570
plot		 remove
LRK54_RS10575
plot		 remove
LRK54_RS10580		 remove
LRK54_RS10585
plot		 remove
LRK54_RS10590
plot