Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 314 experiments or choose conditions or try the comparative fitness browser

500 ntLRK54_RS10525 and LRK54_RS10530 are separated by 215 nucleotidesLRK54_RS10530 and LRK54_RS10535 are separated by 242 nucleotidesLRK54_RS10535 and LRK54_RS10540 are separated by 1 nucleotidesLRK54_RS10540 and LRK54_RS10545 are separated by 168 nucleotides LRK54_RS10525: LRK54_RS10525 - glutathione S-transferase family protein, at 2,323,449 to 2,324,201 _RS10525 LRK54_RS10530: LRK54_RS10530 - S9 family peptidase, at 2,324,417 to 2,326,753 _RS10530 LRK54_RS10535: LRK54_RS10535 - M56 family metallopeptidase, at 2,326,996 to 2,328,882 _RS10535 LRK54_RS10540: LRK54_RS10540 - BlaI/MecI/CopY family transcriptional regulator, at 2,328,884 to 2,329,270 _RS10540 LRK54_RS10545: LRK54_RS10545 - TonB-dependent receptor, at 2,329,439 to 2,332,684 _RS10545
Group Condition LRK54_RS10525 LRK54_RS10530 LRK54_RS10535 LRK54_RS10540 LRK54_RS10545
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.1 -0.2 -0.2 -2.4 +0.1
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.7 -0.5 -0.1 -0.9 -0.1
biofilm assay; planktonic sample planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.6 -0.3 -0.2 -1.0 -0.1
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.5 -0.2 -0.3 -0.8 -0.1
stress R2A with Calcium chloride 250 mM -0.4 -0.6 -0.1 -0.8 +0.0
stress R2A with lithium chloride 15.625 mM +0.1 -0.8 -0.2 -0.8 -0.1
r2a_control R2A control -0.1 -0.0 -0.1 -1.5 -0.0
biofilm assay; biofilm sample biofilm; Day1; NLDM; -0.1 -0.3 -0.3 -0.9 -0.1
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 +0.3 +0.0 -0.3 -1.5 -0.0
stress R2A with bismuth(III) chloride 0.03125 mM -0.1 -0.7 +0.1 -0.9 +0.0
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.3 -0.2 +0.3 -1.0 +0.0
phage 2F-T1 +0.2 +0.0 +0.2 -1.5 +0.0
phage 4B-T2 +0.5 +0.0 +0.1 -1.4 +0.1
phage 4E-T1 -0.0 +0.6 +0.0 -0.9 -0.0
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 -0.5 -0.2 -0.2 +0.7 +0.0
phage 4E-T2 +0.1 +0.7 +0.1 -0.6 +0.1
stress R2A with Nickel (II) chloride 0.3125 mM +0.3 +0.4 +0.2 -0.7 +0.1
r2a_control R2A control +0.2 +0.4 +0.1 +0.6 +0.2
stress R2A with FW104 filtrate 0.5 X +0.2 +0.4 +0.0 +0.8 +0.2
stress R2A with Manganese (II) chloride tetrahydrate 0.3125 mM +0.4 +0.5 +0.3 +0.2 +0.2
r2a_control R2A control +0.3 +0.5 +0.3 +0.5 +0.1
stress R2A with copper (II) chloride 0.3125 mM +0.2 +0.4 +0.1 +0.9 +0.1
r2a_control R2A control +0.2 +0.5 +0.2 +0.6 +0.2
stress R2A with nitrate 250 mM +0.3 +0.5 +0.2 +0.6 +0.2
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM +0.1 +0.1 +0.2 +1.2 +0.2
stress R2A with Aluminum chloride 3.125 mM +0.1 +0.7 +0.3 +0.4 +0.2
stress R2A with Manganese (II) chloride tetrahydrate 0.15625 mM +0.3 +0.5 +0.3 +0.4 +0.2
r2a_control R2A control +0.5 +0.5 +0.3 +0.3 +0.2
stress R2A with m-arsenite 0.078125 mM +0.1 +0.9 +0.2 +0.6 +0.1
stress R2A with m-arsenite 0.078125 mM +0.3 +0.9 +0.3 +0.8 +0.2
remove
LRK54_RS10525
plot
remove
LRK54_RS10530
plot
remove
LRK54_RS10535
remove
LRK54_RS10540
plot
remove
LRK54_RS10545
plot