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Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS10465 and LRK54_RS10470 are separated by 152 nucleotides
LRK54_RS10470 and LRK54_RS10475 are separated by 275 nucleotides
LRK54_RS10475 and LRK54_RS10480 overlap by 4 nucleotides
LRK54_RS10480 and LRK54_RS10485 are separated by 79 nucleotides
LRK54_RS10465: LRK54_RS10465 - M61 family metallopeptidase, at 2,309,638 to 2,311,536
_RS10465
LRK54_RS10470: LRK54_RS10470 - tRNA-Arg, at 2,311,689 to 2,311,765
_RS10470
LRK54_RS10475: LRK54_RS10475 - type I restriction-modification system subunit M, at 2,312,041 to 2,314,116
_RS10475
LRK54_RS10480: LRK54_RS10480 - restriction endonuclease subunit S, at 2,314,113 to 2,315,393
_RS10480
LRK54_RS10485: LRK54_RS10485 - type II toxin-antitoxin system RelE/ParE family toxin, at 2,315,473 to 2,315,754
_RS10485
Group
Condition
LRK54
_RS10465
LRK54
_RS10470
LRK54
_RS10475
LRK54
_RS10480
LRK54
_RS10485
stress
R2A with bismuth(III) chloride 0.03125 mM
-1.7
N.D.
-0.4
-0.6
-1.6
stress
R2A with lithium chloride 15.625 mM
-1.9
N.D.
-0.3
-0.6
-0.8
stress
R2A with ammonium iron(II) sulfate 2.5 mM
-1.6
N.D.
-0.3
-0.5
-0.8
stress
R2A with Uranyl acetate 2.5 mM
-1.2
N.D.
-0.4
-0.7
-0.8
stress
R2A with lithium chloride 15.625 mM
-2.0
N.D.
-0.1
-0.6
-0.3
r2a_control
R2A control
-1.0
N.D.
-0.5
-0.7
-0.7
stress
R2A with lead(II) chloride 0.625 mM
-1.0
N.D.
-0.4
-0.4
-1.0
stress
R2A with bismuth(III) chloride 0.03125 mM
-1.3
N.D.
-0.2
-0.5
-0.7
stress
R2A with sulfate 250 mM
-1.1
N.D.
-0.4
-0.8
-0.4
stress
R2A with Calcium chloride 250 mM
-1.3
N.D.
-0.2
-0.4
-0.8
stress
R2A with Cesium chloride 3.90625 mM
-1.1
N.D.
-0.3
-0.6
-0.7
carbon source
acetate 20 mM
-1.6
N.D.
-0.3
-0.3
-0.4
stress
R2A with Calcium chloride 250 mM
-0.8
N.D.
-0.3
-0.7
-0.9
stress
R2A with Magnesium sulfate 3.90625 mM
-1.4
N.D.
-0.2
-0.4
-0.6
stress
R2A with sodium bromide 250 mM
-1.2
N.D.
-0.3
-0.6
-0.4
stress
R2A with Cesium chloride 3.90625 mM
-1.0
N.D.
-0.1
-0.6
-0.8
stress
R2A with Ferric chloride 1.5625 mM
-1.4
N.D.
-0.3
-0.4
-0.4
stress
R2A with mercury (II) chloride 0.009765625 mM
-1.1
N.D.
-0.1
-0.7
-0.5
r2a_control
R2A control
-0.9
N.D.
-0.2
-0.4
-1.0
stress
R2A with Calcium chloride 125 mM
-0.7
N.D.
-0.3
-0.5
-1.0
stress
R2A with Calcium chloride 125 mM
-0.8
N.D.
-0.2
-0.5
-0.8
stress
R2A with Chloride 250 mM
-1.3
N.D.
-0.3
-0.4
-0.4
stress
R2A with Magnesium sulfate 3.90625 mM
-1.3
N.D.
-0.1
-0.5
-0.4
r2a_control
R2A control
-0.8
N.D.
-0.2
-0.4
-0.9
stress
R2A with sodium bromide 250 mM
-1.3
N.D.
-0.2
-0.4
-0.4
biofilm assay; biofilm sample
biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
+0.3
N.D.
-0.1
-0.4
-2.0
carbon source
a-Cyclodextrin 20 mM
-1.2
N.D.
+1.0
+0.7
+0.0
stress
R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
+1.6
N.D.
-0.3
-0.3
-0.3
carbon source
a-Cyclodextrin 20 mM
-1.0
N.D.
+0.8
+0.7
+0.3
stress
R2A_PIPES with Aluminum chloride 1.125 mM
+1.7
N.D.
-0.0
-0.3
-0.5
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