Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS10425 and LRK54_RS10430 are separated by 58 nucleotidesLRK54_RS10430 and LRK54_RS10435 are separated by 85 nucleotidesLRK54_RS10435 and LRK54_RS10440 are separated by 191 nucleotidesLRK54_RS10440 and LRK54_RS10445 are separated by 56 nucleotides LRK54_RS10425: LRK54_RS10425 - hypothetical protein, at 2,298,817 to 2,299,080 _RS10425 LRK54_RS10430: LRK54_RS10430 - alkaline phosphatase, at 2,299,139 to 2,300,896 _RS10430 LRK54_RS10435: LRK54_RS10435 - glycerophosphodiester phosphodiesterase, at 2,300,982 to 2,302,091 _RS10435 LRK54_RS10440: LRK54_RS10440 - TonB-dependent receptor, at 2,302,283 to 2,304,550 _RS10440 LRK54_RS10445: LRK54_RS10445 - lysoplasmalogenase, at 2,304,607 to 2,305,362 _RS10445
Group Condition LRK54_RS10425 LRK54_RS10430 LRK54_RS10435 LRK54_RS10440 LRK54_RS10445
stress R2A with chromate 0.0048828125 mM -0.7 -0.2 -0.1 +0.2 -0.4
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM -0.4 -0.1 -0.0 -0.1 -0.4
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 -0.2 -0.1 -0.5 -0.1 +0.0
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.1 -0.0 -0.7 -0.0 -0.2
stress R2A with Cobalt chloride 0.078125 mM -0.4 +0.1 -0.2 -0.1 -0.3
stress R2A with chromate 0.0048828125 mM +0.1 -0.1 -0.4 +0.1 -0.3
stress R2A with Nickel (II) chloride 0.3125 mM -0.4 -0.0 +0.0 +0.3 -0.3
stress R2A with Selective_ion_mix_1 1 X -0.3 +0.1 -0.2 +0.2 -0.2
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 -0.7 +0.1 +0.2 +0.0 -0.0
pH R2A_PIPES pH 4.25 +0.1 +0.1 +0.0 +0.0 -0.6
stress R2A with Nickel (II) chloride 0.3125 mM -0.5 +0.2 -0.1 +0.2 -0.1
phage 4B-T2 -0.6 +0.0 +0.2 +0.1 +0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.4 -0.2 -0.2 -0.0 -0.2
stress R2A with Other_metal_mix 1 X -0.2 +0.2 -0.2 +0.1 +0.2
anaerobic Anaerobic, acetate donor; nitrate electron acceptor -0.3 +0.0 -0.1 +0.0 +0.4
stress R2A with Zinc chloride 0.625 mM -0.4 -0.1 +0.1 +0.2 +0.3
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM +0.4 +0.0 -0.3 -0.2 +0.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.4 +0.3 +0.3 +0.1 +0.0
phage 3E-T2 +0.3 +0.1 +0.3 +0.0 -0.2
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.4 -0.1 +0.3 -0.1 -0.1
no phage control No phage control -0.3 +0.3 +0.2 +0.1 +0.3
phage 2F-T2 -0.2 +0.1 +0.3 +0.1 +0.3
phage 4E-T2 -0.1 +0.2 +0.3 +0.1 +0.2
phage S3-T1 +0.4 +0.2 +0.4 +0.0 -0.2
carbon source a-Cyclodextrin 20 mM +0.3 +0.1 +0.2 -0.0 +0.2
phage SA-T1 +0.2 +0.1 +0.3 +0.1 +0.2
phage S5-T2 +0.0 +0.2 +0.3 -0.1 +0.4
phage SA-T2 +0.3 +0.1 +0.2 +0.1 +0.2
phage 4B-T1 +0.2 +0.2 +0.4 +0.1 +0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.5 +0.1 +0.3 +0.1 +0.3
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