Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS10320 and LRK54_RS10325 are separated by 321 nucleotidesLRK54_RS10325 and LRK54_RS10330 overlap by 4 nucleotidesLRK54_RS10330 and LRK54_RS10335 are separated by 224 nucleotidesLRK54_RS10335 and LRK54_RS10340 overlap by 4 nucleotides LRK54_RS10320: LRK54_RS10320 - dihydroxy-acid dehydratase, at 2,273,211 to 2,274,926 _RS10320 LRK54_RS10325: LRK54_RS10325 - 3-isopropylmalate dehydrogenase, at 2,275,248 to 2,276,345 _RS10325 LRK54_RS10330: LRK54_RS10330 - 3-isopropylmalate dehydratase small subunit, at 2,276,342 to 2,276,986 _RS10330 LRK54_RS10335: LRK54_RS10335 - 3-isopropylmalate dehydratase large subunit, at 2,277,211 to 2,278,623 _RS10335 LRK54_RS10340: LRK54_RS10340 - branched-chain amino acid transaminase, at 2,278,620 to 2,279,621 _RS10340
Group Condition LRK54_RS10320 LRK54_RS10325 LRK54_RS10330 LRK54_RS10335 LRK54_RS10340
carbon source pyruvate 20 mM -3.7 -3.4 -4.6 -4.3 -3.4
carbon source Gly-Glu 20 mM -3.4 -4.0 -3.9 -3.8 -3.7
carbon source pyruvate 20 mM -4.0 -3.0 -4.7 -3.9 -3.2
carbon source D-Trehalose 20 mM -3.7 -4.1 -4.2 -3.7 -2.6
carbon source D-Maltose 20 mM -3.6 -3.3 -4.7 -3.9 -2.7
carbon source D-Glucose 20 mM -5.1 -3.7 -2.3 -4.2 -2.8
carbon source Gly-Glu 20 mM -4.0 -3.1 -3.4 -3.3 -3.3
carbon source NAG 20 mM -4.4 -4.4 -2.4 -3.7 -2.2
carbon source D-Maltose 20 mM -2.9 -3.3 -3.8 -3.3 -2.6
carbon source acetate 20 mM -2.8 -2.9 -3.2 -3.8 -2.8
carbon source D-Glucose-6-Phosphate 20 mM -2.9 -3.2 -3.7 -2.9 -2.6
carbon source acetate 20 mM -3.2 -3.6 -2.1 -3.7 -2.8
carbon source NAG 20 mM -4.6 -2.9 -2.5 -3.0 -2.2
carbon source D-Glucose-6-Phosphate 20 mM -2.7 -3.1 -3.1 -3.0 -2.8
carbon source D-Glucose 20 mM -2.8 -4.0 -2.2 -2.9 -2.7
carbon source D-Raffinose 20 mM -2.3 -2.7 -4.5 -2.9 -2.0
carbon source D-Glucosamine Hydrochloride 20 mM -3.1 -2.9 -2.5 -3.1 -2.5
carbon source D-Trehalose 20 mM -2.3 -3.4 -2.8 -2.8 -2.8
carbon source D-Glucosamine Hydrochloride 20 mM -2.8 -3.3 -2.4 -3.1 -2.4
carbon source L-Glutamic 20 mM -2.5 -2.9 -2.6 -3.5 -2.0
carbon source L-Glutamic 20 mM -3.2 -3.2 -1.3 -3.0 -2.2
carbon source D-Raffinose 20 mM -2.8 -2.8 -2.2 -2.8 -2.2
carbon source a-Cyclodextrin 20 mM -2.9 -2.6 -1.8 -2.9 -1.6
carbon source a-Cyclodextrin 20 mM -2.3 -2.4 -0.6 -2.2 -0.9
carbon source D-Glucose (C) and 20 AA mix; 30C -1.5 -2.3 -0.5 -2.1 -1.7
carbon source D-Glucose (C) and 20 AA mix; 20C -1.6 -1.7 -0.2 -1.1 -1.5
biofilm assay; planktonic sample planktonic; Day1; NLDM; -1.6 -1.0 -0.9 -0.6 -1.2
biofilm assay; planktonic sample planktonic; Day1; NLDM; -1.5 -1.1 -1.0 -0.6 -0.9
biofilm assay; planktonic sample planktonic; Day2; NLDM; -2.1 -0.8 -0.4 -0.8 -1.0
biofilm assay; biofilm sample biofilm; Day2; NLDM; -1.6 -1.0 -0.6 -0.8 -0.9
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