Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS10205 and LRK54_RS10210 overlap by 1 nucleotidesLRK54_RS10210 and LRK54_RS10215 are separated by 13 nucleotidesLRK54_RS10215 and LRK54_RS10220 are separated by 67 nucleotidesLRK54_RS10220 and LRK54_RS10225 are separated by 94 nucleotides LRK54_RS10205: LRK54_RS10205 - aldose epimerase, at 2,248,945 to 2,249,946 _RS10205 LRK54_RS10210: LRK54_RS10210 - pyridoxal-phosphate dependent enzyme, at 2,249,946 to 2,250,893 _RS10210 LRK54_RS10215: LRK54_RS10215 - sterol desaturase family protein, at 2,250,907 to 2,252,025 _RS10215 LRK54_RS10220: LRK54_RS10220 - DMT family transporter, at 2,252,093 to 2,252,974 _RS10220 LRK54_RS10225: LRK54_RS10225 - DNA-3-methyladenine glycosylase I, at 2,253,069 to 2,253,650 _RS10225
Group Condition LRK54_RS10205 LRK54_RS10210 LRK54_RS10215 LRK54_RS10220 LRK54_RS10225
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 -0.0 -0.5 -0.4 -0.4 -0.1
stress R2A_PIPES with Aluminum chloride 1.125 mM +0.2 -1.3 -0.3 +0.2 -0.3
stress R2A with Nickel (II) chloride 0.3125 mM -0.2 +0.1 -0.3 -0.4 -0.6
stress R2A with Selective_ion_mix_1 1 X +0.2 -0.6 -0.0 -0.3 -0.6
pH R2A_PIPES pH 4.25 +0.2 -1.1 +0.0 -0.1 -0.3
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM -0.1 +0.3 -0.6 -0.5 -0.2
stress R2A with chromate 0.0048828125 mM +0.0 -0.9 -0.4 -0.0 +0.4
stress R2A with Cesium chloride 3.90625 mM +0.2 -0.1 -0.0 -0.6 -0.4
biofilm assay; biofilm sample biofilm; Day2; NLDM; -0.1 -0.8 -0.2 +0.2 +0.1
stress R2A with Aluminum chloride 3.125 mM +0.2 -0.0 -0.3 -0.3 -0.4
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM +0.1 -0.7 -0.2 +0.4 -0.1
stress R2A with m-arsenite 0.078125 mM +0.1 +0.2 +0.2 -0.4 -0.5
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.0 +0.3 +0.2 -0.2 -0.6
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -0.0 -0.8 -0.0 +0.2 +0.3
stress R2A with bismuth(III) chloride 0.03125 mM -0.2 +0.4 -0.6 -0.0 +0.2
carbon source NAG 20 mM -0.7 +0.2 -0.1 +0.1 +0.2
stress R2A with chromate 0.0048828125 mM -0.2 +0.1 -0.1 -0.4 +0.6
phage 3E-T1 -0.2 +0.3 -0.2 -0.3 +0.3
carbon source acetate 20 mM +0.1 -0.2 +0.2 -0.3 +0.4
stress R2A with SpecU metal mix 1 X +0.5 +0.4 -0.4 -0.4 +0.1
phage 1E-T2 +0.3 -0.2 -0.2 +0.0 +0.3
phage phage 31.1 -0.2 +0.5 -0.3 +0.2 +0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.1 +0.5 +0.2 +0.2 -0.4
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors +0.4 -0.1 +0.4 -0.4 -0.0
stress R2A with mercury (II) chloride 0.009765625 mM +0.2 -0.0 -0.1 -0.3 +0.7
phage 2A-T2 +0.1 +0.6 +0.0 -0.3 +0.2
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors +0.6 +0.4 +0.2 -0.2 -0.1
carbon source D-Glucose-6-Phosphate 20 mM +0.1 +0.6 -0.2 +0.5 +0.0
phage 4B-T1 +0.0 -0.1 +0.1 +0.3 +0.7
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.2 +1.1 +0.2 +0.2 -0.0
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