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Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS10085 and LRK54_RS10090 overlap by 1 nucleotides
LRK54_RS10090 and LRK54_RS10095 are separated by 173 nucleotides
LRK54_RS10095 and LRK54_RS10100 overlap by 4 nucleotides
LRK54_RS10100 and LRK54_RS10105 are separated by 10 nucleotides
LRK54_RS10085: LRK54_RS10085 - CDP-glycerol glycerophosphotransferase family protein, at 2,216,650 to 2,217,693
_RS10085
LRK54_RS10090: LRK54_RS10090 - glycosyltransferase family 2 protein, at 2,217,693 to 2,218,508
_RS10090
LRK54_RS10095: LRK54_RS10095 - SDR family oxidoreductase, at 2,218,682 to 2,219,632
_RS10095
LRK54_RS10100: LRK54_RS10100 - glycosyltransferase family 2 protein, at 2,219,629 to 2,220,555
_RS10100
LRK54_RS10105: LRK54_RS10105 - glycosyltransferase family 2 protein, at 2,220,566 to 2,221,402
_RS10105
Group
Condition
LRK54
_RS10085
LRK54
_RS10090
LRK54
_RS10095
LRK54
_RS10100
LRK54
_RS10105
stress
R2A with bismuth(III) chloride 0.03125 mM
-1.2
-1.3
-0.1
-0.1
-2.7
pH
R2A_PIPES pH 4
-1.2
-1.3
-0.1
+0.0
-0.8
pH
R2A_PIPES pH 4
-1.1
-1.3
-0.0
+0.1
-0.7
biofilm assay; planktonic sample
Planktonic; Day4; SGW; pH7
-1.0
-0.7
+0.2
-0.3
-1.0
stress
R2A with lithium chloride 15.625 mM
-1.1
-0.6
-0.1
-0.2
-0.5
stress
R2A with Chloride 250 mM
+1.3
+0.6
+0.1
+0.1
+0.2
stress
R2A with Gallium(III)chloride 0.78125 mM
+1.3
+0.5
+0.1
+0.2
+0.3
r2a_control
R2A control
+1.4
+0.5
+0.2
+0.2
+0.2
carbon source
Gly-Glu 20 mM
+1.4
+0.1
+0.2
+0.3
+0.5
carbon source
casaminos 2 mg/mL
+1.1
+0.6
+0.2
+0.3
+0.3
stress
R2A with Chloride 250 mM
+1.3
+0.6
+0.1
+0.0
+0.5
stress
R2A with Cesium chloride 3.90625 mM
+1.9
+0.4
+0.2
+0.1
+0.0
stress
R2A with Magnesium sulfate 3.90625 mM
+1.3
+0.7
+0.2
+0.1
+0.4
r2a_control
R2A control
+1.7
+0.6
+0.2
+0.2
+0.1
stress
R2A with Cesium chloride 3.90625 mM
+1.9
+0.7
+0.2
+0.1
-0.0
r2a_control
R2A control
+1.6
+0.6
+0.2
+0.2
+0.2
stress
R2A with lead(II) chloride 0.625 mM
+1.6
+0.7
+0.1
+0.2
+0.3
carbon source
casaminos 2 mg/mL
+1.1
+0.6
+0.3
+0.4
+0.5
carbon source
a-Cyclodextrin 20 mM
+1.1
+0.7
+0.6
+0.3
+0.4
stress
R2A with Calcium chloride 250 mM
+1.3
+0.8
+0.3
+0.3
+0.5
stress
R2A with lead(II) chloride 0.625 mM
+1.8
+0.7
+0.2
+0.1
+0.4
stress
R2A with Barium chloride 1.25 mM
+2.0
+0.7
+0.2
+0.2
+0.3
stress
R2A with Barium chloride 1.25 mM
+2.1
+0.8
+0.1
+0.2
+0.3
stress
R2A with Strontium chloride 3.90625 mM
+1.8
+0.7
+0.4
+0.3
+0.4
stress
R2A with Calcium chloride 125 mM
+1.4
+1.1
+0.2
+0.3
+0.7
stress
R2A with Gallium(III)chloride 0.78125 mM
+1.5
+1.0
+0.3
+0.3
+0.7
carbon source
a-Cyclodextrin 20 mM
+1.6
+1.1
+0.7
+0.7
+0.7
stress
R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
+2.8
+0.8
+0.6
+0.6
+0.2
stress
R2A with Calcium chloride 250 mM
+2.8
+2.3
+0.3
+0.4
+0.9
stress
R2A with Calcium chloride 125 mM
+2.8
+2.4
+0.4
+0.5
+1.0
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