Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS10010 and LRK54_RS10015 are separated by 63 nucleotidesLRK54_RS10015 and LRK54_RS10020 are separated by 110 nucleotidesLRK54_RS10020 and LRK54_RS10025 are separated by 210 nucleotidesLRK54_RS10025 and LRK54_RS10030 are separated by 496 nucleotides LRK54_RS10010: LRK54_RS10010 - type II secretion system secretin GspD, at 2,195,275 to 2,197,608 _RS10010 LRK54_RS10015: LRK54_RS10015 - ATP-dependent helicase HrpB, at 2,197,672 to 2,200,179 _RS10015 LRK54_RS10020: LRK54_RS10020 - EAL domain-containing protein, at 2,200,290 to 2,202,941 _RS10020 LRK54_RS10025: LRK54_RS10025 - hypothetical protein, at 2,203,152 to 2,204,288 _RS10025 LRK54_RS10030: LRK54_RS10030 - M20/M25/M40 family metallo-hydrolase, at 2,204,785 to 2,206,158 _RS10030
Group Condition LRK54_RS10010 LRK54_RS10015 LRK54_RS10020 LRK54_RS10025 LRK54_RS10030
biofilm assay; planktonic sample planktonic; Day1; NLDM; -0.6 -0.7 -0.3 -0.2 -0.2
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 -0.6 -0.0 -0.5 -0.1 -0.2
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.3 -0.3 -0.1 -0.3 -0.2
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -0.1 +0.0 -0.3 -0.1 -0.3
r2a_control R2A control -0.2 -0.1 -0.1 -0.2 -0.2
stress R2A_PIPES with Cadmium chloride 16 uM -0.1 -0.4 -0.1 -0.2 +0.0
stress R2A with Uranyl acetate 2.5 mM -0.1 +0.2 -0.1 -0.3 -0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.1 -0.2 +0.2 -0.2 +0.0
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.1 -0.2 +0.2 -0.2 -0.2
stress R2A with Cobalt chloride 0.15625 mM +0.1 -0.2 +0.2 -0.1 -0.2
stress R2A with Nickel (II) chloride 0.3125 mM +0.1 -0.2 -0.0 -0.2 +0.2
stress R2A with sulfate 250 mM +0.1 +0.2 +0.0 -0.1 -0.3
phage 1E-T1 +0.1 -0.3 +0.1 +0.2 -0.1
stress R2A with silver chloride 1 mM -0.1 +0.4 +0.1 -0.1 -0.2
r2a_control R2A control +0.1 +0.2 +0.1 -0.2 -0.1
r2a_control R2A control +0.2 +0.1 +0.1 -0.1 -0.2
r2a_control R2A control +0.2 +0.2 +0.1 -0.2 -0.2
stress R2A with Zinc chloride 0.625 mM +0.3 -0.3 +0.1 +0.1 +0.0
phage 2B-T1 +0.1 -0.2 +0.2 +0.2 +0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.1 +0.5 +0.2 -0.2 +0.0
stress R2A with Cadmium chloride hemipentahydrate 0.0390625 mM +0.2 -0.1 +0.2 -0.0 +0.2
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors +0.2 +0.3 +0.1 -0.1 -0.1
stress R2A with chromate 0.0048828125 mM +0.2 -0.1 +0.3 +0.0 +0.1
phage 1C-T1 +0.1 +0.2 +0.1 +0.3 -0.2
stress R2A with chromate 0.0048828125 mM +0.2 +0.1 +0.1 -0.2 +0.2
stress R2A with copper (II) chloride 0.3125 mM +0.2 +0.3 +0.1 -0.0 +0.1
stress R2A with Aluminum chloride 3.125 mM +0.2 +0.4 +0.2 +0.0 -0.1
stress R2A with Manganese (II) chloride tetrahydrate 3.125 mM +0.2 +0.2 +0.2 +0.0 +0.1
phage 4E-T2 +0.2 +0.5 +0.1 +0.0 +0.1
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x -0.0 +1.0 +0.1 +0.0 +0.2
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