Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS09780 and LRK54_RS09785 are separated by 134 nucleotidesLRK54_RS09785 and LRK54_RS09790 are separated by 80 nucleotidesLRK54_RS09790 and LRK54_RS09795 are separated by 122 nucleotidesLRK54_RS09795 and LRK54_RS09800 are separated by 88 nucleotides LRK54_RS09780: LRK54_RS09780 - beta-ketoacyl-[acyl-carrier-protein] synthase family protein, at 2,135,000 to 2,136,193 _RS09780 LRK54_RS09785: LRK54_RS09785 - YdcF family protein, at 2,136,328 to 2,137,032 _RS09785 LRK54_RS09790: LRK54_RS09790 - hypothetical protein, at 2,137,113 to 2,137,553 _RS09790 LRK54_RS09795: LRK54_RS09795 - oxygen-dependent coproporphyrinogen oxidase, at 2,137,676 to 2,138,590 _RS09795 LRK54_RS09800: LRK54_RS09800 - hypothetical protein, at 2,138,679 to 2,139,350 _RS09800
Group Condition LRK54_RS09780 LRK54_RS09785 LRK54_RS09790 LRK54_RS09795 LRK54_RS09800
stress R2A with bismuth(III) chloride 0.03125 mM -3.5 +0.4 +0.4 N.D. N.D.
pH R2A_PIPES pH 4 -2.8 +0.3 +0.1 N.D. N.D.
pH R2A_PIPES pH 4 -2.4 +0.3 +0.1 N.D. N.D.
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 -0.5 -1.1 -0.4 N.D. N.D.
stress R2A with arsenate 31.25 mM -1.8 +0.1 +0.4 N.D. N.D.
stress R2A with arsenate 31.25 mM -1.4 +0.1 +0.0 N.D. N.D.
stress R2A with nitrate 250 mM -1.2 +0.0 +0.1 N.D. N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.6 -0.3 -0.0 N.D. N.D.
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.0 -0.6 -0.3 N.D. N.D.
stress R2A with sodium bromide 250 mM -1.0 -0.1 +0.2 N.D. N.D.
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM -0.7 -0.2 +0.0 N.D. N.D.
stress R2A with nitrate 250 mM -1.1 +0.2 +0.1 N.D. N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.1 -0.3 -0.5 N.D. N.D.
stress R2A_PIPES with Cobalt chloride 256 uM -0.4 -0.3 +0.2 N.D. N.D.
stress R2A with sulfate 250 mM -0.3 -0.4 +0.2 N.D. N.D.
stress R2A with Chloride 250 mM -0.5 -0.1 +0.3 N.D. N.D.
stress R2A with sodium bromide 250 mM -0.6 +0.2 +0.1 N.D. N.D.
stress R2A with beryllium sulfate tetrahydrate 1.953125 mM -0.4 -0.2 +0.3 N.D. N.D.
stress R2A with Chloride 250 mM -0.7 +0.2 +0.4 N.D. N.D.
stress R2A with Calcium chloride 125 mM -0.4 +0.3 +0.1 N.D. N.D.
stress R2A with m-arsenite 0.078125 mM -0.4 +0.2 +0.3 N.D. N.D.
stress R2A with lithium chloride 15.625 mM -0.4 +0.1 +0.3 N.D. N.D.
stress R2A with lithium chloride 15.625 mM -0.5 +0.2 +0.3 N.D. N.D.
stress R2A with Cobalt chloride 0.15625 mM -0.4 +0.6 -0.1 N.D. N.D.
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM -0.6 +0.5 +0.3 N.D. N.D.
stress R2A with silver chloride 1 mM -0.4 +0.4 +0.3 N.D. N.D.
stress R2A with Aluminum chloride 3.125 mM +0.6 -0.1 -0.1 N.D. N.D.
phage 2E-T2 -0.1 +0.6 -0.1 N.D. N.D.
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.1 +0.5 +0.3 N.D. N.D.
carbon source a-Cyclodextrin 20 mM +0.9 +0.1 +0.1 N.D. N.D.
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