Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS09760 and LRK54_RS09765 are separated by 62 nucleotidesLRK54_RS09765 and LRK54_RS09770 are separated by 47 nucleotidesLRK54_RS09770 and LRK54_RS09775 are separated by 2 nucleotidesLRK54_RS09775 and LRK54_RS09780 overlap by 4 nucleotides LRK54_RS09760: LRK54_RS09760 - 3-oxoacyl-ACP reductase FabG, at 2,132,079 to 2,132,816 _RS09760 LRK54_RS09765: LRK54_RS09765 - hypothetical protein, at 2,132,879 to 2,133,409 _RS09765 LRK54_RS09770: LRK54_RS09770 - glycosyltransferase family 2 protein, at 2,133,457 to 2,134,206 _RS09770 LRK54_RS09775: LRK54_RS09775 - beta-ketoacyl synthase chain length factor, at 2,134,209 to 2,135,003 _RS09775 LRK54_RS09780: LRK54_RS09780 - beta-ketoacyl-[acyl-carrier-protein] synthase family protein, at 2,135,000 to 2,136,193 _RS09780
Group Condition LRK54_RS09760 LRK54_RS09765 LRK54_RS09770 LRK54_RS09775 LRK54_RS09780
stress R2A with bismuth(III) chloride 0.03125 mM -2.2 +0.4 -3.0 -3.6 -3.5
pH R2A_PIPES pH 4 -1.3 +0.1 -3.2 -2.7 -2.8
pH R2A_PIPES pH 4 -1.4 +0.0 -2.1 -2.6 -2.4
stress R2A with arsenate 31.25 mM -0.8 +0.0 -1.6 -1.7 -1.8
stress R2A with nitrate 250 mM -1.5 +0.0 -1.3 -1.4 -1.1
stress R2A with arsenate 31.25 mM -0.9 +0.1 -1.0 -1.2 -1.4
stress R2A with nitrate 250 mM -0.7 +0.0 -1.1 -1.2 -1.2
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM -1.0 +0.1 -1.1 -0.7 -0.7
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 -0.7 -0.2 -1.1 -0.5 -0.5
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM -0.9 +0.1 -0.7 -0.6 -0.7
pH R2A_PIPES pH 4.25 -0.8 -0.0 -0.7 -0.7 -0.5
stress R2A with sodium bromide 250 mM -0.3 +0.1 -0.6 -0.8 -1.0
stress R2A with Chloride 250 mM -0.2 +0.1 -0.8 -0.8 -0.7
biofilm assay; planktonic sample planktonic; Day1; NLDM; -0.5 -0.6 -0.6 -0.5 -0.2
stress R2A with sodium bromide 250 mM -0.5 -0.0 -0.7 -0.4 -0.6
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.4 -0.1 -0.4 -0.5 -0.6
stress R2A with nitrite 50 mM -0.4 +0.0 -0.7 -0.5 -0.5
stress R2A with Chloride 250 mM -0.4 -0.1 -0.5 -0.5 -0.5
stress R2A_PIPES with Cobalt chloride 256 uM -0.5 -0.0 -0.7 -0.3 -0.4
stress R2A with silver chloride 1 mM -0.6 -0.1 -0.3 -0.5 -0.4
pH R2A_PIPES pH 4.25 -0.3 -0.0 -0.5 -0.5 -0.5
stress R2A with Gallium(III)chloride 0.78125 mM -0.2 +0.0 -0.7 -0.5 -0.4
stress R2A with Calcium chloride 250 mM -0.2 -0.1 -0.5 -0.5 -0.5
stress R2A with m-arsenite 0.078125 mM -0.0 +0.1 -0.7 -0.5 -0.4
stress R2A with Magnesium sulfate 3.90625 mM -0.4 +0.1 -0.7 -0.3 -0.2
stress R2A with silver chloride 1 mM -0.7 +0.2 -0.3 -0.2 -0.4
stress R2A with Nickel (II) chloride 0.3125 mM +0.5 -0.4 -0.3 +0.3 +0.4
stress R2A with Aluminum chloride 3.125 mM +0.5 -0.1 +0.4 +0.7 +0.6
carbon source a-Cyclodextrin 20 mM +0.4 -0.1 +1.2 +0.6 +0.4
carbon source a-Cyclodextrin 20 mM +0.9 -0.1 +1.3 +0.9 +0.9
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