Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS09200 and LRK54_RS09205 are separated by 136 nucleotidesLRK54_RS09205 and LRK54_RS09210 overlap by 31 nucleotidesLRK54_RS09210 and LRK54_RS09215 are separated by 13 nucleotidesLRK54_RS09215 and LRK54_RS09220 are separated by 186 nucleotides LRK54_RS09200: LRK54_RS09200 - MFS transporter, at 2,015,325 to 2,016,638 _RS09200 LRK54_RS09205: LRK54_RS09205 - hypothetical protein, at 2,016,775 to 2,017,086 _RS09205 LRK54_RS09210: LRK54_RS09210 - anhydro-N-acetylmuramic acid kinase, at 2,017,056 to 2,018,186 _RS09210 LRK54_RS09215: LRK54_RS09215 - peptidoglycan DD-metalloendopeptidase family protein, at 2,018,200 to 2,019,645 _RS09215 LRK54_RS09220: LRK54_RS09220 - tyrosine--tRNA ligase, at 2,019,832 to 2,021,043 _RS09220
Group Condition LRK54_RS09200 LRK54_RS09205 LRK54_RS09210 LRK54_RS09215 LRK54_RS09220
stress R2A with bismuth(III) chloride 0.03125 mM -1.1 +0.2 -1.4 -4.8 N.D.
carbon source Gly-Glu 20 mM -2.8 +0.3 -3.3 +1.1 N.D.
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 -2.1 -0.3 -1.8 -0.2 N.D.
carbon source D-Glucose-6-Phosphate 20 mM -2.1 -0.1 -1.7 -0.5 N.D.
stress R2A with Calcium chloride 250 mM -0.9 +0.1 -0.7 -2.9 N.D.
carbon source Gly-Glu 20 mM -2.6 -0.1 -2.9 +1.3 N.D.
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM -1.5 +0.0 -1.1 -1.2 N.D.
stress R2A with sodium bromide 250 mM -0.7 +0.0 -0.7 -2.4 N.D.
stress R2A with SpecU metal mix 1 X -0.8 +0.3 -0.6 -2.7 N.D.
stress R2A with arsenate 31.25 mM -1.1 -0.0 -0.9 -1.9 N.D.
stress R2A with SpecU metal mix 1 X -0.7 +0.2 -0.6 -2.7 N.D.
stress R2A with Ferric chloride 1.5625 mM -1.1 +0.0 -0.7 -2.0 N.D.
stress R2A with Chloride 250 mM -0.7 +0.1 -0.7 -2.4 N.D.
carbon source acetate 20 mM -2.0 +0.1 -2.1 +0.4 N.D.
carbon source acetate 20 mM -2.2 -0.0 -1.4 +0.2 N.D.
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors -1.8 +0.5 -2.2 +0.2 N.D.
carbon source a-Cyclodextrin 20 mM -2.7 +0.0 -1.9 +1.5 N.D.
carbon source a-Cyclodextrin 20 mM -1.9 +0.1 -1.7 +1.4 N.D.
stress R2A with Zinc chloride 0.625 mM -1.4 +0.2 -0.9 +1.3 N.D.
stress R2A with m-arsenite 0.078125 mM -1.3 -0.0 -1.1 +2.2 N.D.
stress R2A with m-arsenite 0.078125 mM -1.3 -0.0 -0.5 +2.1 N.D.
stress R2A with Selective_ion_mix_1 1 X +0.9 -0.3 +0.8 +1.7 N.D.
stress R2A with Selective_ion_mix_1 1 X +0.8 -0.3 +1.0 +1.7 N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +1.6 -0.0 +1.2 +1.6 N.D.
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM +0.4 -0.0 +0.6 +3.6 N.D.
stress R2A with Selective_ion_mix_1 1 X +1.8 -0.5 +1.9 +2.6 N.D.
stress R2A with Selective_ion_mix_1 1 X +2.2 -0.3 +2.4 +3.3 N.D.
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM +1.2 +0.2 +1.4 +4.9 N.D.
stress R2A with Manganese (II) chloride tetrahydrate 2.5 mM +2.9 +0.1 +3.3 +5.7 N.D.
stress R2A with Manganese (II) chloride tetrahydrate 2.5 mM +3.8 +0.2 +4.1 +5.8 N.D.
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