Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS09060 and LRK54_RS09065 are separated by 82 nucleotidesLRK54_RS09065 and LRK54_RS09070 are separated by 258 nucleotidesLRK54_RS09070 and LRK54_RS09075 are separated by 247 nucleotidesLRK54_RS09075 and LRK54_RS09080 are separated by 173 nucleotides LRK54_RS09060: LRK54_RS09060 - helix-turn-helix transcriptional regulator, at 1,978,245 to 1,978,469 _RS09060 LRK54_RS09065: LRK54_RS09065 - hypothetical protein, at 1,978,552 to 1,978,908 _RS09065 LRK54_RS09070: LRK54_RS09070 - SseB family protein, at 1,979,167 to 1,979,901 _RS09070 LRK54_RS09075: LRK54_RS09075 - tyrosine-type recombinase/integrase, at 1,980,149 to 1,980,346 _RS09075 LRK54_RS09080: LRK54_RS09080 - cyclic beta 1-2 glucan synthetase, at 1,980,520 to 1,989,162 _RS09080
Group Condition LRK54_RS09060 LRK54_RS09065 LRK54_RS09070 LRK54_RS09075 LRK54_RS09080
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x -0.0 -0.1 -0.1 -0.1 -0.3
carbon source a-Cyclodextrin 20 mM -0.1 -0.3 -0.1 -0.2 +0.0
carbon source acetate 20 mM -0.2 -0.2 -0.1 -0.2 +0.0
stress R2A with Selective_ion_mix_1 1 X -0.4 +0.1 +0.0 -0.3 -0.1
phage 1C-T1 -0.3 -0.2 -0.1 -0.1 -0.0
pH R2A_PIPES pH 4.25 -0.3 -0.3 -0.1 +0.0 -0.1
biofilm assay; planktonic sample planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.3 -0.1 -0.1 -0.1 +0.0
phage 1E-T1 -0.2 -0.3 -0.1 +0.2 -0.0
phage 3E-T2 -0.3 +0.1 -0.2 +0.1 -0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.6 +0.0 +0.1 +0.1 -0.0
biofilm assay; biofilm sample biofilm; Day2; NLDM; -0.4 -0.2 +0.1 +0.1 +0.0
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.3 -0.2 +0.0 +0.0 +0.1
stress R2A with Selective_ion_mix_1 1 X +0.2 -0.2 +0.1 -0.4 +0.1
phage 2A-T2 +0.1 -0.4 -0.1 +0.2 -0.0
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors -0.4 -0.1 +0.1 +0.2 +0.2
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 +0.1 -0.3 +0.1 +0.1 -0.2
stress R2A with Chloride 250 mM -0.2 +0.2 -0.1 -0.0 +0.1
stress R2A with bismuth(III) chloride 0.03125 mM -0.2 -0.5 +0.2 +0.2 +0.3
biofilm assay; biofilm sample biofilm; Day1; NLDM; -0.3 +0.1 +0.1 +0.1 +0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.2 -0.1 -0.1 -0.1 +0.1
stress R2A with nitrate 250 mM -0.2 +0.2 -0.1 +0.2 +0.1
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM -0.3 +0.3 +0.4 -0.4 +0.2
stress R2A with m-arsenite 0.078125 mM +0.1 +0.3 -0.1 -0.1 +0.1
stress R2A with Cobalt chloride 0.15625 mM +0.2 +0.2 +0.0 -0.2 +0.2
stress R2A with silver chloride 1 mM -0.2 +0.2 +0.1 +0.2 +0.2
stress R2A with Nickel (II) chloride 0.3125 mM +0.2 +0.2 -0.1 +0.1 +0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.1 +0.4 -0.0 +0.0 +0.1
phage 2B-T2 +0.4 -0.1 +0.1 +0.2 +0.0
stress R2A_PIPES with Nickel (II) chloride 424 uM +0.1 +0.3 +0.1 +0.2 -0.0
stress R2A with silver chloride 1 mM +0.0 +0.3 +0.2 +0.1 +0.1
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