Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS09040 and LRK54_RS09045 are separated by 19 nucleotidesLRK54_RS09045 and LRK54_RS09050 are separated by 116 nucleotidesLRK54_RS09050 and LRK54_RS09055 overlap by 11 nucleotidesLRK54_RS09055 and LRK54_RS09060 are separated by 50 nucleotides LRK54_RS09040: LRK54_RS09040 - hypothetical protein, at 1,973,307 to 1,973,786 _RS09040 LRK54_RS09045: LRK54_RS09045 - toll/interleukin-1 receptor domain-containing protein, at 1,973,806 to 1,975,179 _RS09045 LRK54_RS09050: LRK54_RS09050 - restriction endonuclease subunit S, at 1,975,296 to 1,976,594 _RS09050 LRK54_RS09055: LRK54_RS09055 - type I restriction-modification system subunit M, at 1,976,584 to 1,978,194 _RS09055 LRK54_RS09060: LRK54_RS09060 - helix-turn-helix transcriptional regulator, at 1,978,245 to 1,978,469 _RS09060
Group Condition LRK54_RS09040 LRK54_RS09045 LRK54_RS09050 LRK54_RS09055 LRK54_RS09060
stress R2A with bismuth(III) chloride 0.03125 mM -0.8 -0.8 -0.1 +0.4 -0.2
stress R2A with sulfate 250 mM -0.4 -0.1 -0.4 -0.1 -0.3
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors -0.6 -0.1 -0.1 -0.1 -0.4
stress R2A with Chloride 250 mM -0.4 -0.3 -0.3 +0.0 -0.2
stress R2A with Selective_ion_mix_1 1 X -0.4 -0.2 +0.0 -0.1 -0.4
stress R2A with Magnesium sulfate 3.90625 mM -0.2 -0.3 -0.6 +0.1 -0.0
stress R2A with SpecU metal mix 1 X -0.3 -0.3 -0.4 -0.0 -0.1
r2a_control R2A control -0.4 -0.3 -0.3 +0.0 -0.1
stress R2A with Chloride 250 mM -0.4 -0.2 -0.4 -0.0 -0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.1 -0.1 -0.5 -0.0 -0.3
r2a_control R2A control -0.2 -0.3 -0.4 +0.0 -0.1
stress R2A with silver chloride 1 mM -0.3 -0.2 -0.7 +0.1 +0.0
stress R2A with Calcium chloride 125 mM -0.3 -0.3 -0.3 +0.1 -0.1
r2a_control R2A control -0.4 -0.3 -0.2 +0.0 -0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.3 +0.4 -0.3 -0.1 -0.6
stress R2A with Cesium chloride 3.90625 mM -0.3 -0.4 -0.4 +0.1 +0.1
stress R2A with lead(II) chloride 0.625 mM -0.4 -0.2 -0.3 +0.1 -0.1
carbon source a-Cyclodextrin 20 mM -0.3 +0.1 -0.4 -0.2 -0.1
stress R2A with Nickel (II) chloride 0.3125 mM -0.6 -0.3 -0.2 +0.1 +0.2
stress R2A with Chloride 250 mM -0.2 -0.4 -0.4 +0.1 +0.0
stress R2A with Calcium chloride 125 mM -0.4 -0.4 -0.1 +0.1 +0.1
r2a_control R2A control -0.4 -0.2 -0.3 +0.1 +0.1
stress R2A with chromate 0.0048828125 mM -0.1 -0.6 +0.3 -0.0 -0.0
stress R2A with Selective_ion_mix_1 1 X -0.6 -0.1 +0.3 +0.1 -0.1
phage 1E-T1 -0.3 +0.1 +0.3 -0.1 -0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.1 -0.2 +0.2 +0.0 -0.4
stress R2A with chromate 0.0048828125 mM -0.5 +0.0 +0.4 +0.1 +0.1
phage phage 31.1 -0.1 +0.3 -0.4 +0.3 -0.0
stress R2A with Cobalt chloride 0.15625 mM -0.4 +0.6 +0.1 +0.1 +0.2
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 -0.3 +0.5 +0.8 +0.2 +0.1
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