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Protein
Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS09030 and LRK54_RS09035 are separated by 243 nucleotides
LRK54_RS09035 and LRK54_RS09040 are separated by 28 nucleotides
LRK54_RS09040 and LRK54_RS09045 are separated by 19 nucleotides
LRK54_RS09045 and LRK54_RS09050 are separated by 116 nucleotides
LRK54_RS09030: LRK54_RS09030 - glycosyltransferase family 2 protein, at 1,969,016 to 1,970,041
_RS09030
LRK54_RS09035: LRK54_RS09035 - Tn3 family transposase, at 1,970,285 to 1,973,278
_RS09035
LRK54_RS09040: LRK54_RS09040 - hypothetical protein, at 1,973,307 to 1,973,786
_RS09040
LRK54_RS09045: LRK54_RS09045 - toll/interleukin-1 receptor domain-containing protein, at 1,973,806 to 1,975,179
_RS09045
LRK54_RS09050: LRK54_RS09050 - restriction endonuclease subunit S, at 1,975,296 to 1,976,594
_RS09050
Group
Condition
LRK54
_RS09030
LRK54
_RS09035
LRK54
_RS09040
LRK54
_RS09045
LRK54
_RS09050
stress
R2A with Cesium chloride 3.90625 mM
-0.6
-0.2
-0.3
-0.4
-0.4
stress
R2A with bismuth(III) chloride 0.03125 mM
+0.2
-0.2
-0.8
-0.8
-0.1
stress
R2A with Nickel (II) chloride 0.3125 mM
-0.5
-0.2
-0.3
-0.3
-0.3
stress
R2A with sulfate 250 mM
-0.5
-0.1
-0.4
-0.1
-0.4
r2a_control
R2A control
-0.4
-0.1
-0.5
-0.2
-0.2
stress
R2A with Magnesium sulfate 3.90625 mM
-0.3
-0.1
-0.2
-0.3
-0.6
stress
R2A with Nickel (II) chloride 0.3125 mM
-0.4
+0.1
-0.6
-0.3
-0.2
r2a_control
R2A control
-0.4
-0.2
-0.2
-0.3
-0.4
stress
R2A with lead(II) chloride 0.625 mM
-0.4
-0.1
-0.4
-0.2
-0.3
stress
R2A with silver chloride 1 mM
-0.2
-0.1
-0.3
-0.2
-0.7
stress
R2A with Chloride 250 mM
-0.4
-0.2
+0.0
-0.4
-0.4
stress
R2A with SpecU metal mix 1 X
-0.4
-0.0
-0.3
-0.3
-0.4
r2a_control
R2A control
-0.3
-0.2
-0.4
-0.3
-0.3
stress
R2A with Barium chloride 1.25 mM
-0.4
-0.2
-0.3
-0.3
-0.2
stress
R2A with Chloride 250 mM
-0.3
-0.1
-0.4
-0.3
-0.3
stress
R2A with Calcium chloride 125 mM
-0.1
-0.2
-0.3
-0.3
-0.3
stress
R2A with Chloride 250 mM
-0.2
-0.1
-0.2
-0.4
-0.4
r2a_control
R2A control
-0.3
-0.1
-0.4
-0.2
-0.3
stress
R2A with Ferric chloride 1.5625 mM
-0.3
-0.2
-0.2
-0.3
-0.3
stress
R2A with Chloride 250 mM
-0.2
-0.1
-0.4
-0.2
-0.4
stress
R2A with Magnesium sulfate 3.90625 mM
-0.4
-0.1
-0.3
-0.2
-0.3
r2a_control
R2A control
-0.4
-0.1
-0.2
-0.3
-0.3
stress
R2A with Gallium(III)chloride 0.78125 mM
-0.3
-0.2
-0.4
-0.1
-0.3
stress
R2A with m-arsenite 0.078125 mM
-0.3
-0.1
-0.2
-0.4
-0.3
stress
R2A with bismuth(III) chloride 0.03125 mM
-0.2
-0.2
-0.3
-0.3
-0.3
stress
R2A with chromate 0.0048828125 mM
+0.3
+0.0
-0.1
-0.6
+0.3
carbon source
a-Cyclodextrin 20 mM
+0.3
+0.2
-0.3
+0.1
-0.4
stress
R2A with chromate 0.0048828125 mM
+0.3
-0.2
-0.5
+0.0
+0.4
phage
phage 31.1
+0.4
+0.1
-0.1
+0.3
-0.4
biofilm assay; planktonic sample
Planktonic; Day4; SGW; pH7
-0.0
-0.1
-0.3
+0.5
+0.8
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