Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS08760 and LRK54_RS08765 are separated by 38 nucleotidesLRK54_RS08765 and LRK54_RS08770 overlap by 7 nucleotidesLRK54_RS08770 and LRK54_RS08775 are separated by 191 nucleotidesLRK54_RS08775 and LRK54_RS08780 are separated by 211 nucleotides LRK54_RS08760: LRK54_RS08760 - transaldolase, at 1,908,562 to 1,909,656 _RS08760 LRK54_RS08765: LRK54_RS08765 - HAD family hydrolase, at 1,909,695 to 1,910,411 _RS08765 LRK54_RS08770: LRK54_RS08770 - glucose-6-phosphate dehydrogenase, at 1,910,405 to 1,911,811 _RS08770 LRK54_RS08775: LRK54_RS08775 - GNAT family N-acetyltransferase, at 1,912,003 to 1,912,380 _RS08775 LRK54_RS08780: LRK54_RS08780 - cupin domain-containing protein, at 1,912,592 to 1,912,978 _RS08780
Group Condition LRK54_RS08760 LRK54_RS08765 LRK54_RS08770 LRK54_RS08775 LRK54_RS08780
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 -1.0 -0.6 -0.3 -2.1 -0.2
stress R2A with nitrate 250 mM -2.8 +0.3 +0.0 -1.3 -0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -1.8 -0.2 +0.1 -1.4 +0.1
biofilm assay; planktonic sample planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -1.8 +0.0 +0.1 -1.4 -0.0
stress R2A with nitrate 250 mM -2.6 +0.2 +0.1 -0.7 -0.1
stress R2A with arsenate 15.625 mM -2.7 +0.2 +0.3 -0.9 +0.2
carbon source a-Cyclodextrin 20 mM +0.9 -0.3 -0.1 -3.1 -0.1
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM -2.9 +0.3 +0.2 +0.1 +0.0
stress R2A with Cadmium chloride hemipentahydrate 0.0390625 mM -2.8 +0.0 +0.1 +0.4 +0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; -1.6 +0.4 +0.3 -1.3 +0.2
stress R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM -2.7 +0.3 +0.2 +0.1 +0.1
stress R2A with nitrite 50 mM -2.8 +0.4 +0.2 +0.2 +0.1
stress R2A with Manganese (II) chloride tetrahydrate 3.125 mM -2.6 +0.2 +0.0 +0.7 -0.1
stress R2A with Nickel (II) chloride 0.3125 mM -3.0 +0.4 +0.1 +0.7 +0.1
stress R2A with nitrite 25 mM -2.6 +0.3 +0.4 +0.0 +0.2
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM -2.7 +0.2 +0.3 +0.3 +0.2
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM -2.8 +0.3 +0.2 +0.7 +0.0
stress R2A with nitrite 25 mM -2.7 +0.3 +0.3 +0.7 -0.0
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -2.0 +0.4 +0.3 -0.4 +0.3
stress R2A with Zinc chloride 0.625 mM -2.4 +0.2 +0.2 +0.4 +0.2
stress R2A with nitrite 50 mM -2.2 +0.3 +0.3 -0.1 +0.3
stress R2A with SpecU metal mix 1 X -2.5 +0.5 +0.2 +0.2 +0.4
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM -2.2 +0.2 +0.2 +0.7 -0.0
stress R2A with Zinc chloride 0.625 mM -2.3 +0.3 +0.3 +0.4 +0.2
stress R2A with arsenate 15.625 mM -2.6 +0.4 +0.3 +1.0 +0.2
stress R2A with silver chloride 1 mM -1.9 +0.3 +0.3 +0.6 +0.4
r2a_control R2A control -1.6 +0.2 +0.2 +0.9 +0.4
stress R2A with Chloride 250 mM -1.6 +0.2 +0.3 +1.1 +0.2
stress R2A with lithium chloride 15.625 mM -1.5 +0.3 +0.3 +1.0 +0.5
stress R2A with Nickel (II) chloride 0.3125 mM -2.1 +1.8 +1.1 +0.4 +0.8
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