Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS08630 and LRK54_RS08635 are separated by 92 nucleotidesLRK54_RS08635 and LRK54_RS08640 are separated by 103 nucleotidesLRK54_RS08640 and LRK54_RS08645 are separated by 82 nucleotidesLRK54_RS08645 and LRK54_RS08650 overlap by 4 nucleotides LRK54_RS08630: LRK54_RS08630 - YecA family protein, at 1,878,730 to 1,879,404 _RS08630 LRK54_RS08635: LRK54_RS08635 - DUF4336 domain-containing protein, at 1,879,497 to 1,880,228 _RS08635 LRK54_RS08640: LRK54_RS08640 - pirin family protein, at 1,880,332 to 1,881,165 _RS08640 LRK54_RS08645: LRK54_RS08645 - carbohydrate ABC transporter permease, at 1,881,248 to 1,882,072 _RS08645 LRK54_RS08650: LRK54_RS08650 - sugar ABC transporter permease, at 1,882,069 to 1,882,962 _RS08650
Group Condition LRK54_RS08630 LRK54_RS08635 LRK54_RS08640 LRK54_RS08645 LRK54_RS08650
stress R2A with bismuth(III) chloride 0.03125 mM -0.7 -1.1 -0.0 -0.2 +0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.7 -0.7 +0.1 -0.0 -0.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.9 -0.3 -0.1 +0.1 -0.4
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 -0.9 -0.3 -0.2 -0.2 -0.1
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 -1.0 -0.1 -0.0 -0.1 -0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.9 -0.3 -0.0 +0.0 -0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; -0.8 -0.2 -0.1 -0.0 -0.2
carbon source Gly-Glu 20 mM -0.7 -0.7 +0.1 +0.1 +0.0
carbon source D-Glucose-6-Phosphate 20 mM -0.3 -0.0 +0.1 -0.3 -0.4
stress R2A_PIPES with Nickel (II) chloride 424 uM -0.1 -0.5 +0.2 -0.2 -0.3
carbon source a-Cyclodextrin 20 mM -0.8 +0.2 -0.0 -0.1 -0.1
carbon source D-Glucose 20 mM -0.6 +0.1 +0.1 -0.2 +0.0
pH R2A pH5 -0.5 -0.3 +0.1 +0.1 +0.1
stress R2A with lithium chloride 15.625 mM -0.6 +0.2 +0.1 +0.0 -0.2
pH R2A pH7 -0.6 +0.1 +0.2 +0.1 +0.1
stress R2A with ammonium iron(II) sulfate 2.5 mM -0.6 +0.3 +0.0 +0.1 +0.1
stress R2A with Cesium chloride 3.90625 mM -0.3 +0.3 +0.1 +0.1 -0.1
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.5 +0.4 -0.1 -0.3 -0.2
phage 1A-T2 +0.3 -0.4 +0.1 +0.2 +0.1
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM +0.4 -0.3 +0.1 +0.2 +0.0
stress R2A with Nickel (II) chloride 0.3125 mM +0.7 -0.7 +0.1 +0.2 +0.0
stress R2A with nitrite 50 mM +0.3 -0.3 +0.1 +0.3 +0.0
stress R2A with chromate 0.0048828125 mM +0.4 -0.2 +0.1 +0.1 +0.3
stress R2A with chromate 0.0048828125 mM +0.1 +0.7 -0.0 -0.3 +0.1
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x +0.8 -0.0 -0.1 -0.1 +0.1
stress R2A with sodium bromide 250 mM -0.1 +0.2 +0.2 +0.2 +0.2
stress R2A with Cobalt chloride 0.15625 mM +0.7 -0.1 -0.1 -0.0 +0.3
stress R2A with beryllium sulfate tetrahydrate 1.953125 mM +1.0 -0.0 +0.1 +0.1 -0.1
carbon source Gly-Glu 20 mM -0.1 +0.4 +0.3 +0.4 +0.3
stress R2A with Cobalt chloride 0.15625 mM +0.8 +0.4 -0.1 +0.2 +0.1
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