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Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS08580 and LRK54_RS08585 are separated by 192 nucleotides
LRK54_RS08585 and LRK54_RS08590 are separated by 21 nucleotides
LRK54_RS08590 and LRK54_RS08595 are separated by 113 nucleotides
LRK54_RS08595 and LRK54_RS08600 overlap by 4 nucleotides
LRK54_RS08580: LRK54_RS08580 - GNAT family N-acetyltransferase, at 1,870,335 to 1,870,868
_RS08580
LRK54_RS08585: LRK54_RS08585 - RimK family alpha-L-glutamate ligase, at 1,871,061 to 1,872,548
_RS08585
LRK54_RS08590: LRK54_RS08590 - hypothetical protein, at 1,872,570 to 1,872,827
_RS08590
LRK54_RS08595: LRK54_RS08595 - shikimate dehydrogenase, at 1,872,941 to 1,873,771
_RS08595
LRK54_RS08600: LRK54_RS08600 - YkgJ family cysteine cluster protein, at 1,873,768 to 1,874,034
_RS08600
Group
Condition
LRK54
_RS08580
LRK54
_RS08585
LRK54
_RS08590
LRK54
_RS08595
LRK54
_RS08600
stress
R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM
N.D.
-3.8
N.D.
-2.7
N.D.
stress
R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM
N.D.
-3.7
N.D.
-2.7
N.D.
stress
R2A with Magnesium sulfate 3.90625 mM
N.D.
-3.5
N.D.
-2.8
N.D.
stress
R2A with silver chloride 1 mM
N.D.
-3.4
N.D.
-2.7
N.D.
stress
R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM
N.D.
-3.5
N.D.
-2.4
N.D.
stress
R2A with Magnesium sulfate 3.90625 mM
N.D.
-3.3
N.D.
-2.5
N.D.
stress
R2A with silver chloride 1 mM
N.D.
-3.3
N.D.
-2.5
N.D.
r2a_control
R2A control
N.D.
-3.0
N.D.
-2.7
N.D.
r2a_control
R2A control
N.D.
-3.0
N.D.
-2.7
N.D.
stress
R2A with mercury (II) chloride 0.009765625 mM
N.D.
-3.1
N.D.
-2.5
N.D.
r2a_control
R2A control
N.D.
-3.0
N.D.
-2.5
N.D.
r2a_control
R2A control
N.D.
-2.9
N.D.
-2.6
N.D.
r2a_control
R2A control
N.D.
-3.1
N.D.
-2.5
N.D.
stress
R2A with selenate 31.25 mM
N.D.
-3.0
N.D.
-2.4
N.D.
stress
R2A with Chloride 250 mM
N.D.
-2.9
N.D.
-2.5
N.D.
stress
R2A with Cesium chloride 3.90625 mM
N.D.
-2.9
N.D.
-2.5
N.D.
stress
R2A with Strontium chloride 3.90625 mM
N.D.
-3.0
N.D.
-2.4
N.D.
stress
R2A with selenate 31.25 mM
N.D.
-2.9
N.D.
-2.4
N.D.
r2a_control
R2A control
N.D.
-2.9
N.D.
-2.4
N.D.
r2a_control
R2A control
N.D.
-3.0
N.D.
-2.3
N.D.
r2a_control
R2A control
N.D.
-2.9
N.D.
-2.4
N.D.
stress
R2A with Barium chloride 1.25 mM
N.D.
-3.0
N.D.
-2.2
N.D.
stress
R2A with sodium bromide 250 mM
N.D.
-3.0
N.D.
-2.2
N.D.
r2a_control
R2A control
N.D.
-3.0
N.D.
-2.2
N.D.
r2a_control
R2A control
N.D.
-3.0
N.D.
-2.2
N.D.
stress
R2A with sodium bromide 250 mM
N.D.
-3.0
N.D.
-2.2
N.D.
stress
R2A with lithium chloride 15.625 mM
N.D.
-3.1
N.D.
-2.1
N.D.
stress
R2A with Cadmium chloride hemipentahydrate 0.0390625 mM
N.D.
-3.5
N.D.
-1.6
N.D.
stress
R2A with Chloride 250 mM
N.D.
-2.9
N.D.
-2.2
N.D.
r2a_control
R2A control
N.D.
-2.9
N.D.
-2.1
N.D.
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