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Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS08445 and LRK54_RS08450 are separated by 4 nucleotides
LRK54_RS08450 and LRK54_RS08455 are separated by 11 nucleotides
LRK54_RS08455 and LRK54_RS08460 are separated by 55 nucleotides
LRK54_RS08460 and LRK54_RS08465 are separated by 221 nucleotides
LRK54_RS08445: LRK54_RS08445 - biopolymer transporter ExbD, at 1,842,285 to 1,842,689
_RS08445
LRK54_RS08450: LRK54_RS08450 - biopolymer transporter ExbD, at 1,842,694 to 1,843,116
_RS08450
LRK54_RS08455: LRK54_RS08455 - MotA/TolQ/ExbB proton channel family protein, at 1,843,128 to 1,843,901
_RS08455
LRK54_RS08460: LRK54_RS08460 - energy transducer TonB, at 1,843,957 to 1,844,616
_RS08460
LRK54_RS08465: LRK54_RS08465 - tetratricopeptide repeat protein, at 1,844,838 to 1,846,103
_RS08465
Group
Condition
LRK54
_RS08445
LRK54
_RS08450
LRK54
_RS08455
LRK54
_RS08460
LRK54
_RS08465
stress
R2A with Calcium chloride 250 mM
N.D.
N.D.
N.D.
N.D.
-1.8
stress
R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
N.D.
N.D.
N.D.
N.D.
-1.7
stress
R2A with Aluminum chloride 3.125 mM
N.D.
N.D.
N.D.
N.D.
-1.3
stress
R2A with Gallium(III)chloride 0.78125 mM
N.D.
N.D.
N.D.
N.D.
-1.1
stress
R2A with Aluminum chloride 3.125 mM
N.D.
N.D.
N.D.
N.D.
-1.1
stress
R2A with Gallium(III)chloride 0.78125 mM
N.D.
N.D.
N.D.
N.D.
-1.0
stress
R2A with Aluminum chloride 1.5625 mM
N.D.
N.D.
N.D.
N.D.
-1.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
N.D.
N.D.
-0.9
stress
R2A with Calcium chloride 125 mM
N.D.
N.D.
N.D.
N.D.
-0.9
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
N.D.
N.D.
-0.8
stress
R2A with Calcium chloride 250 mM
N.D.
N.D.
N.D.
N.D.
-0.8
stress
R2A with Cobalt chloride 0.078125 mM
N.D.
N.D.
N.D.
N.D.
-0.7
stress
R2A with Cobalt chloride 0.15625 mM
N.D.
N.D.
N.D.
N.D.
-0.7
stress
R2A with Cobalt chloride 0.15625 mM
N.D.
N.D.
N.D.
N.D.
-0.7
stress
R2A with Calcium chloride 125 mM
N.D.
N.D.
N.D.
N.D.
-0.7
phage
phage 31.1
N.D.
N.D.
N.D.
N.D.
+0.7
carbon source
D-Glucose-6-Phosphate 20 mM
N.D.
N.D.
N.D.
N.D.
+0.7
stress
R2A with Cesium chloride 3.90625 mM
N.D.
N.D.
N.D.
N.D.
+0.7
carbon source
acetate 20 mM
N.D.
N.D.
N.D.
N.D.
+0.7
stress
R2A with ammonium iron(II) sulfate 2.5 mM
N.D.
N.D.
N.D.
N.D.
+0.7
stress
R2A with Cesium chloride 3.90625 mM
N.D.
N.D.
N.D.
N.D.
+0.7
stress
R2A with bismuth(III) chloride 0.03125 mM
N.D.
N.D.
N.D.
N.D.
+0.8
stress
R2A with lithium chloride 15.625 mM
N.D.
N.D.
N.D.
N.D.
+0.9
stress
R2A with m-arsenite 0.078125 mM
N.D.
N.D.
N.D.
N.D.
+1.0
stress
R2A with m-arsenite 0.078125 mM
N.D.
N.D.
N.D.
N.D.
+1.0
anaerobic
Anaerobic, acetate donor; nitrate and iron electron acceptors
N.D.
N.D.
N.D.
N.D.
+1.0
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
N.D.
N.D.
N.D.
N.D.
+1.0
stress
R2A with lithium chloride 15.625 mM
N.D.
N.D.
N.D.
N.D.
+1.1
carbon source
a-Cyclodextrin 20 mM
N.D.
N.D.
N.D.
N.D.
+2.2
carbon source
a-Cyclodextrin 20 mM
N.D.
N.D.
N.D.
N.D.
+2.4
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