Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS08425 and LRK54_RS08430 are separated by 123 nucleotidesLRK54_RS08430 and LRK54_RS08435 are separated by 88 nucleotidesLRK54_RS08435 and LRK54_RS08440 are separated by 84 nucleotidesLRK54_RS08440 and LRK54_RS08445 are separated by 88 nucleotides LRK54_RS08425: LRK54_RS08425 - response regulator transcription factor, at 1,836,349 to 1,837,023 _RS08425 LRK54_RS08430: LRK54_RS08430 - hybrid sensor histidine kinase/response regulator, at 1,837,147 to 1,840,635 _RS08430 LRK54_RS08435: LRK54_RS08435 - 4'-phosphopantetheinyl transferase superfamily protein, at 1,840,724 to 1,841,368 _RS08435 LRK54_RS08440: LRK54_RS08440 - pyridoxine 5'-phosphate synthase, at 1,841,453 to 1,842,196 _RS08440 LRK54_RS08445: LRK54_RS08445 - biopolymer transporter ExbD, at 1,842,285 to 1,842,689 _RS08445
Group Condition LRK54_RS08425 LRK54_RS08430 LRK54_RS08435 LRK54_RS08440 LRK54_RS08445
carbon source pyruvate 20 mM -2.3 -2.0 N.D. N.D. N.D.
carbon source pyruvate 20 mM -2.0 -1.9 N.D. N.D. N.D.
carbon source acetate 20 mM -1.6 -1.6 N.D. N.D. N.D.
carbon source acetate 20 mM -1.2 -1.1 N.D. N.D. N.D.
r2a_control R2A control +0.6 +0.5 N.D. N.D. N.D.
carbon source D-Glucose-6-Phosphate 20 mM +0.5 +0.6 N.D. N.D. N.D.
stress R2A with nitrite 50 mM +0.6 +0.5 N.D. N.D. N.D.
r2a_control R2A control +0.6 +0.6 N.D. N.D. N.D.
stress R2A with m-arsenite 0.0390625 mM +0.6 +0.5 N.D. N.D. N.D.
r2a_control R2A control +0.7 +0.5 N.D. N.D. N.D.
stress R2A with nitrite 25 mM +0.6 +0.6 N.D. N.D. N.D.
stress R2A with nitrite 50 mM +0.7 +0.5 N.D. N.D. N.D.
carbon source a-Cyclodextrin 20 mM +0.5 +0.7 N.D. N.D. N.D.
r2a_control R2A control +0.6 +0.6 N.D. N.D. N.D.
r2a_control R2A control +0.7 +0.6 N.D. N.D. N.D.
r2a_control R2A control +0.7 +0.5 N.D. N.D. N.D.
stress R2A with Manganese (II) chloride tetrahydrate 1.25 mM +0.6 +0.6 N.D. N.D. N.D.
stress R2A with Manganese (II) chloride tetrahydrate 1.25 mM +0.6 +0.6 N.D. N.D. N.D.
carbon source D-Raffinose 20 mM +0.7 +0.6 N.D. N.D. N.D.
stress R2A with Aluminum chloride 3.125 mM +0.8 +0.6 N.D. N.D. N.D.
anaerobic Anaerobic, acetate donor; nitrate electron acceptor +0.9 +0.9 N.D. N.D. N.D.
stress R2A with m-arsenite 0.078125 mM +1.0 +0.9 N.D. N.D. N.D.
stress R2A with Nickel (II) chloride 0.3125 mM +1.1 +0.9 N.D. N.D. N.D.
stress R2A with m-arsenite 0.078125 mM +1.1 +1.0 N.D. N.D. N.D.
carbon source Gly-Glu 20 mM +1.1 +1.1 N.D. N.D. N.D.
carbon source Gly-Glu 20 mM +1.3 +1.2 N.D. N.D. N.D.
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors +1.4 +1.3 N.D. N.D. N.D.
stress R2A with Aluminum chloride 3.125 mM +1.5 +1.6 N.D. N.D. N.D.
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors +1.8 +1.7 N.D. N.D. N.D.
stress R2A with Nickel (II) chloride 0.3125 mM +1.8 +2.1 N.D. N.D. N.D.
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