Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS08345 and LRK54_RS08350 are separated by 69 nucleotidesLRK54_RS08350 and LRK54_RS08355 are separated by 157 nucleotidesLRK54_RS08355 and LRK54_RS08360 are separated by 10 nucleotidesLRK54_RS08360 and LRK54_RS08365 are separated by 153 nucleotides LRK54_RS08345: LRK54_RS08345 - YafY family transcriptional regulator, at 1,819,308 to 1,820,012 _RS08345 LRK54_RS08350: LRK54_RS08350 - glutathione S-transferase family protein, at 1,820,082 to 1,820,714 _RS08350 LRK54_RS08355: LRK54_RS08355 - hypothetical protein, at 1,820,872 to 1,821,057 _RS08355 LRK54_RS08360: LRK54_RS08360 - DJ-1/PfpI family protein, at 1,821,068 to 1,821,679 _RS08360 LRK54_RS08365: LRK54_RS08365 - class 1 fructose-bisphosphatase, at 1,821,833 to 1,822,864 _RS08365
Group Condition LRK54_RS08345 LRK54_RS08350 LRK54_RS08355 LRK54_RS08360 LRK54_RS08365
stress R2A with Aluminum chloride 3.125 mM -0.5 +0.3 -1.0 -0.7 -0.1
stress R2A with arsenate 15.625 mM +0.1 +0.1 -0.1 +0.0 -1.8
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM -0.6 +0.2 -0.4 -0.2 -0.7
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM -0.6 +0.2 -0.3 -0.3 -0.6
carbon source casaminos 2 mg/mL -0.1 -0.1 +0.0 +0.2 -1.5
stress R2A with arsenate 15.625 mM +0.1 +0.2 +0.1 -0.1 -1.7
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM +0.1 -0.5 -0.1 +0.4 -1.1
carbon source a-Cyclodextrin 20 mM -0.1 -0.0 -0.3 -0.3 -0.3
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 -0.1 -0.3 -0.5 -0.2 +0.1
carbon source casaminos 2 mg/mL +0.3 -0.0 +0.1 +0.0 -1.3
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 -0.9 +0.1 -0.3 +0.1 +0.2
stress R2A with Aluminum chloride 3.125 mM -0.3 +0.1 -0.6 -0.4 +0.3
stress R2A with bismuth(III) chloride 0.03125 mM +1.0 +0.2 +0.1 -0.5 -1.2
phage 1E-T1 -0.7 -0.1 +0.1 +0.3 -0.0
stress R2A with arsenate 31.25 mM +0.2 +0.4 +0.2 -0.3 -0.6
stress R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM +0.4 -0.2 +0.3 +0.2 -0.8
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM -0.2 +0.5 -0.8 -0.2 +0.6
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM +0.7 -0.6 +0.0 +0.9 -1.1
stress R2A with Magnesium sulfate 3.90625 mM +0.4 +0.1 +0.1 -0.2 -0.4
stress R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM +0.4 -0.3 +0.2 +0.5 -0.6
biofilm assay; biofilm sample biofilm; Day2; NLDM; -0.4 -0.0 -0.2 +0.6 +0.0
stress R2A with Chloride 250 mM -0.4 +0.3 +0.1 -0.2 +0.2
stress R2A with Selective_ion_mix_1 1 X +0.4 +0.0 -0.4 -0.2 +0.3
stress R2A with silver chloride 1 mM -0.0 +0.5 -0.1 -0.4 +0.3
stress R2A with Nickel (II) chloride 0.625 mM +0.5 -0.0 +0.4 +0.0 -0.5
stress R2A with Calcium chloride 250 mM +0.3 +0.3 -0.2 -0.0 +0.4
stress R2A with Nickel (II) chloride 0.625 mM +0.6 +0.1 +0.5 +0.2 -0.5
stress R2A with Nickel (II) chloride 0.3125 mM -0.5 +0.3 -0.2 -0.1 +1.7
stress R2A with chromate 0.0048828125 mM +1.6 +0.0 +0.5 +0.1 +0.1
stress R2A with chromate 0.0048828125 mM +1.4 +0.4 +0.3 +0.2 -0.0
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