Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS08320 and LRK54_RS08325 are separated by 12 nucleotidesLRK54_RS08325 and LRK54_RS08330 overlap by 4 nucleotidesLRK54_RS08330 and LRK54_RS08335 are separated by 140 nucleotidesLRK54_RS08335 and LRK54_RS08340 are separated by 78 nucleotides LRK54_RS08320: LRK54_RS08320 - phenylalanine 4-monooxygenase, at 1,814,453 to 1,815,340 _RS08320 LRK54_RS08325: LRK54_RS08325 - GDSL-type esterase/lipase family protein, at 1,815,353 to 1,816,030 _RS08325 LRK54_RS08330: LRK54_RS08330 - RES family NAD+ phosphorylase, at 1,816,027 to 1,816,749 _RS08330 LRK54_RS08335: LRK54_RS08335 - MbcA/ParS/Xre antitoxin family protein, at 1,816,890 to 1,817,300 _RS08335 LRK54_RS08340: LRK54_RS08340 - DUF885 family protein, at 1,817,379 to 1,819,184 _RS08340
Group Condition LRK54_RS08320 LRK54_RS08325 LRK54_RS08330 LRK54_RS08335 LRK54_RS08340
stress R2A with beryllium sulfate tetrahydrate 1.953125 mM +0.3 +0.0 -1.1 -2.1 -0.1
carbon source D-Glucose 20 mM -2.2 -0.1 -0.0 -0.6 -0.1
carbon source D-Trehalose 20 mM -2.3 -0.0 -0.1 -0.5 -0.0
carbon source pyruvate 20 mM -2.3 +0.1 -0.1 -0.4 -0.1
carbon source D-Glucose (C) and 20 AA mix; 30C -1.7 +0.1 +0.1 -1.1 -0.1
carbon source NAG 20 mM -2.4 +0.2 -0.0 -0.5 -0.0
carbon source D-Glucose-6-Phosphate 20 mM -1.9 -0.3 +0.1 -0.5 +0.1
carbon source D-Maltose 20 mM -2.1 +0.0 -0.1 -0.5 -0.0
carbon source pyruvate 20 mM -2.2 +0.1 +0.0 -0.5 +0.0
carbon source acetate 20 mM -1.9 +0.0 -0.3 -0.3 -0.1
carbon source Gly-Glu 20 mM -1.8 +0.0 -0.4 -0.5 +0.1
carbon source D-Glucose (C) and 20 AA mix; 20C -1.2 +0.0 +0.0 -1.2 -0.1
carbon source D-Maltose 20 mM -1.9 -0.0 -0.1 -0.5 -0.0
carbon source D-Trehalose 20 mM -1.6 +0.2 +0.1 -1.1 +0.0
carbon source D-Glucose-6-Phosphate 20 mM -1.8 -0.3 -0.2 -0.1 +0.0
carbon source D-Glucose 20 mM -1.9 +0.0 +0.0 -0.5 +0.0
carbon source D-Raffinose 20 mM -1.6 -0.1 -0.1 -0.4 -0.0
carbon source NAG 20 mM -1.8 -0.1 +0.1 -0.3 -0.0
carbon source D-Glucosamine Hydrochloride 20 mM -1.8 +0.1 -0.1 -0.3 -0.0
carbon source acetate 20 mM -2.4 -0.2 -0.0 +0.4 -0.1
carbon source Gly-Glu 20 mM -2.1 +0.2 -0.2 -0.0 +0.1
carbon source D-Glucosamine Hydrochloride 20 mM -2.0 +0.1 +0.1 -0.2 +0.1
carbon source D-Glucose (C); 30C -1.0 +0.1 +0.2 -1.1 +0.1
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x +0.6 -0.1 +0.2 -2.4 -0.2
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 -0.4 -0.0 +0.3 -1.6 +0.0
phage 1B-T1 +0.5 +0.0 -0.0 -1.5 -0.2
stress R2A with bismuth(III) chloride 0.03125 mM +1.1 -0.2 +0.1 -1.8 -0.3
stress R2A with nitrite 25 mM +0.6 +0.1 +0.2 -1.2 -0.3
carbon source a-Cyclodextrin 20 mM -1.7 -0.1 +0.2 +0.3 +1.4
carbon source a-Cyclodextrin 20 mM -1.0 -0.0 +0.3 +0.6 +1.3
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