Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS08315 and LRK54_RS08320 are separated by 137 nucleotidesLRK54_RS08320 and LRK54_RS08325 are separated by 12 nucleotidesLRK54_RS08325 and LRK54_RS08330 overlap by 4 nucleotidesLRK54_RS08330 and LRK54_RS08335 are separated by 140 nucleotides LRK54_RS08315: LRK54_RS08315 - Lrp/AsnC family transcriptional regulator, at 1,813,839 to 1,814,315 _RS08315 LRK54_RS08320: LRK54_RS08320 - phenylalanine 4-monooxygenase, at 1,814,453 to 1,815,340 _RS08320 LRK54_RS08325: LRK54_RS08325 - GDSL-type esterase/lipase family protein, at 1,815,353 to 1,816,030 _RS08325 LRK54_RS08330: LRK54_RS08330 - RES family NAD+ phosphorylase, at 1,816,027 to 1,816,749 _RS08330 LRK54_RS08335: LRK54_RS08335 - MbcA/ParS/Xre antitoxin family protein, at 1,816,890 to 1,817,300 _RS08335
Group Condition LRK54_RS08315 LRK54_RS08320 LRK54_RS08325 LRK54_RS08330 LRK54_RS08335
carbon source D-Glucose-6-Phosphate 20 mM -0.1 -1.9 -0.3 +0.1 -0.5
carbon source pyruvate 20 mM -0.1 -2.3 +0.1 -0.1 -0.4
carbon source D-Glucose 20 mM +0.1 -2.2 -0.1 -0.0 -0.6
carbon source D-Trehalose 20 mM +0.1 -2.3 -0.0 -0.1 -0.5
stress R2A with beryllium sulfate tetrahydrate 1.953125 mM +0.2 +0.3 +0.0 -1.1 -2.1
carbon source acetate 20 mM -0.1 -1.9 +0.0 -0.3 -0.3
carbon source pyruvate 20 mM +0.1 -2.2 +0.1 +0.0 -0.5
carbon source D-Maltose 20 mM +0.1 -2.1 +0.0 -0.1 -0.5
carbon source NAG 20 mM +0.2 -2.4 +0.2 -0.0 -0.5
carbon source Gly-Glu 20 mM +0.2 -1.8 +0.0 -0.4 -0.5
carbon source D-Glucose-6-Phosphate 20 mM -0.1 -1.8 -0.3 -0.2 -0.1
carbon source D-Glucose (C) and 20 AA mix; 30C +0.2 -1.7 +0.1 +0.1 -1.1
carbon source D-Maltose 20 mM +0.1 -1.9 -0.0 -0.1 -0.5
carbon source D-Trehalose 20 mM +0.1 -1.6 +0.2 +0.1 -1.1
carbon source D-Glucose (C) and 20 AA mix; 20C +0.1 -1.2 +0.0 +0.0 -1.2
carbon source D-Glucose 20 mM +0.2 -1.9 +0.0 +0.0 -0.5
carbon source D-Glucosamine Hydrochloride 20 mM -0.1 -2.0 +0.1 +0.1 -0.2
carbon source acetate 20 mM +0.1 -2.4 -0.2 -0.0 +0.4
carbon source Gly-Glu 20 mM +0.3 -2.1 +0.2 -0.2 -0.0
carbon source D-Glucose (C); 30C +0.1 -1.0 +0.1 +0.2 -1.1
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x +0.2 +0.6 -0.1 +0.2 -2.4
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 +0.3 -0.4 -0.0 +0.3 -1.6
stress R2A with selenate 31.25 mM +0.6 +0.1 -0.1 -0.2 -1.5
carbon source a-Cyclodextrin 20 mM +0.7 -1.7 -0.1 +0.2 +0.3
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.2 +0.7 -0.2 -0.3 -0.9
stress R2A with nitrite 25 mM +0.4 +0.6 +0.1 +0.2 -1.2
carbon source a-Cyclodextrin 20 mM +0.5 -1.0 -0.0 +0.3 +0.6
stress R2A with m-arsenite 0.078125 mM +0.6 +0.5 +0.2 +0.3 -0.9
stress R2A with bismuth(III) chloride 0.03125 mM +1.6 +1.1 -0.2 +0.1 -1.8
stress R2A with Aluminum chloride 3.125 mM +0.8 +0.6 +0.2 +0.1 -0.7
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