Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS08230 and LRK54_RS08235 overlap by 4 nucleotidesLRK54_RS08235 and LRK54_RS08240 are separated by 23 nucleotidesLRK54_RS08240 and LRK54_RS08245 are separated by 54 nucleotidesLRK54_RS08245 and LRK54_RS08250 are separated by 171 nucleotides LRK54_RS08230: LRK54_RS08230 - hypothetical protein, at 1,798,937 to 1,799,260 _RS08230 LRK54_RS08235: LRK54_RS08235 - hypothetical protein, at 1,799,257 to 1,799,742 _RS08235 LRK54_RS08240: LRK54_RS08240 - DUF883 family protein, at 1,799,766 to 1,800,128 _RS08240 LRK54_RS08245: LRK54_RS08245 - DUF1328 domain-containing protein, at 1,800,183 to 1,800,338 _RS08245 LRK54_RS08250: LRK54_RS08250 - YbhB/YbcL family Raf kinase inhibitor-like protein, at 1,800,510 to 1,801,133 _RS08250
Group Condition LRK54_RS08230 LRK54_RS08235 LRK54_RS08240 LRK54_RS08245 LRK54_RS08250
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 -0.4 N.D. -1.2 N.D. -0.5
stress R2A with selenate 31.25 mM -0.8 N.D. -1.0 N.D. -0.1
stress R2A with Cobalt chloride 0.15625 mM -1.4 N.D. +0.1 N.D. -0.4
biofilm assay; biofilm sample biofilm; Day2; NLDM; -0.7 N.D. -0.7 N.D. -0.3
stress R2A with Nickel (II) chloride 0.3125 mM -0.1 N.D. -0.9 N.D. -0.5
stress R2A with Calcium chloride 250 mM -1.1 N.D. -0.6 N.D. +0.2
stress R2A with silver chloride 1 mM -0.4 N.D. -1.1 N.D. +0.2
stress R2A with Nickel (II) chloride 0.3125 mM +0.1 N.D. -1.6 N.D. +0.2
stress R2A with Chloride 250 mM -0.6 N.D. -0.7 N.D. -0.1
r2a_control R2A control -0.7 N.D. -0.6 N.D. -0.1
stress R2A with Calcium chloride 125 mM -1.2 N.D. -0.2 N.D. +0.0
stress R2A with Chloride 250 mM -0.4 N.D. -1.0 N.D. -0.0
r2a_control R2A control -0.8 N.D. -0.6 N.D. +0.2
stress R2A with Ferric chloride 1.5625 mM -0.4 N.D. -1.0 N.D. +0.3
stress R2A with bismuth(III) chloride 0.03125 mM -0.5 N.D. -0.8 N.D. +0.1
r2a_control R2A control -0.5 N.D. -0.9 N.D. +0.3
stress R2A with sodium bromide 250 mM -0.3 N.D. -1.0 N.D. +0.2
stress R2A with ammonium iron(II) sulfate 2.5 mM -0.7 N.D. -0.6 N.D. +0.2
stress R2A with lithium chloride 15.625 mM -0.5 N.D. -0.8 N.D. +0.4
stress R2A with Cesium chloride 3.90625 mM -0.2 N.D. -0.9 N.D. +0.3
stress R2A with Calcium chloride 250 mM -0.7 N.D. -0.5 N.D. +0.4
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors +0.1 N.D. -1.5 N.D. +0.6
stress R2A_PIPES with Nickel (II) chloride 424 uM -0.1 N.D. -1.0 N.D. +0.4
stress R2A with Chloride 250 mM -0.2 N.D. -0.6 N.D. +0.5
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors -0.1 N.D. -0.6 N.D. +0.7
anaerobic Anaerobic, acetate donor; nitrate electron acceptor +0.1 N.D. -0.7 N.D. +0.8
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 +1.4 N.D. -1.1 N.D. +0.6
carbon source a-Cyclodextrin 20 mM +0.8 N.D. -0.2 N.D. +0.9
pH R2A_PIPES pH 4 +0.9 N.D. +0.3 N.D. +0.4
carbon source a-Cyclodextrin 20 mM +0.9 N.D. -0.1 N.D. +0.8
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