Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS08210 and LRK54_RS08215 are separated by 32 nucleotidesLRK54_RS08215 and LRK54_RS08220 overlap by 4 nucleotidesLRK54_RS08220 and LRK54_RS08225 are separated by 191 nucleotidesLRK54_RS08225 and LRK54_RS08230 overlap by 4 nucleotides LRK54_RS08210: LRK54_RS08210 - hypothetical protein, at 1,795,983 to 1,796,846 _RS08210 LRK54_RS08215: LRK54_RS08215 - cupin domain-containing protein, at 1,796,879 to 1,797,259 _RS08215 LRK54_RS08220: LRK54_RS08220 - hypothetical protein, at 1,797,256 to 1,797,558 _RS08220 LRK54_RS08225: LRK54_RS08225 - AI-2E family transporter, at 1,797,750 to 1,798,940 _RS08225 LRK54_RS08230: LRK54_RS08230 - hypothetical protein, at 1,798,937 to 1,799,260 _RS08230
Group Condition LRK54_RS08210 LRK54_RS08215 LRK54_RS08220 LRK54_RS08225 LRK54_RS08230
stress R2A with Cobalt chloride 0.15625 mM -0.1 -0.1 +0.3 +0.1 -1.4
phage 3E-T1 -0.1 +0.1 +0.1 -0.2 -1.1
biofilm assay; planktonic sample planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.1 +0.1 -0.2 -0.4 -0.5
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x -0.3 -0.8 -0.0 +0.0 -0.1
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM +0.1 -0.2 -0.1 -0.7 -0.2
stress R2A with nitrite 25 mM +0.1 -0.0 -0.3 -0.0 -0.8
stress R2A with Calcium chloride 250 mM +0.1 +0.1 -0.1 -0.1 -1.1
r2a_control R2A control -0.0 -0.1 +0.1 -0.1 -0.8
stress R2A with chromate 0.0048828125 mM +0.1 -0.5 -0.2 +0.2 -0.5
stress R2A with Calcium chloride 125 mM +0.1 +0.0 +0.1 +0.1 -1.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.1 -0.1 +0.2 -0.2 -0.6
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.0 -0.4 -0.1 -0.5 +0.2
phage 1D-T2 -0.1 +0.2 -0.1 -0.4 -0.4
stress R2A with ammonium iron(II) sulfate 2.5 mM +0.1 +0.2 -0.1 -0.1 -0.7
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM +0.1 +0.2 -0.0 -1.2 +0.4
stress R2A with Aluminum chloride 3.125 mM +0.0 +0.2 +0.0 -1.1 +0.3
carbon source D-Glucose (C) and 20 AA mix; 20C -0.0 +0.0 +0.2 +0.1 -0.9
stress R2A with lead(II) chloride 0.625 mM -0.1 +0.3 -0.0 -0.1 -0.7
stress R2A with Aluminum chloride 3.125 mM +0.0 -0.0 +0.0 -0.7 +0.4
pH R2A_PIPES pH 4 +0.1 +0.1 +0.0 -0.6 +0.4
stress R2A_PIPES with Cadmium chloride 16 uM -0.0 -0.3 -0.1 -0.1 +0.6
r2a_control R2A control +0.1 -0.1 -0.3 -0.3 +0.6
stress R2A with Nickel (II) chloride 0.3125 mM +0.2 +0.2 +0.2 -0.6 +0.1
stress R2A with Cobalt chloride 0.15625 mM -0.2 +0.4 -0.2 -0.4 +0.5
stress R2A with Selective_ion_mix_1 1 X +0.1 -0.0 +0.0 -0.4 +0.6
pH R2A_PIPES pH 4 -0.0 +0.0 +0.0 -0.6 +0.9
phage 2E-T2 +0.0 +0.1 -0.1 -0.2 +0.7
carbon source a-Cyclodextrin 20 mM +0.1 -0.4 +0.1 -0.1 +0.9
stress R2A with Selective_ion_mix_1 1 X +0.1 +0.1 +0.1 -0.3 +0.6
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 -0.3 -0.3 -0.1 +0.2 +1.4
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