Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS07930 and LRK54_RS07935 are separated by 284 nucleotidesLRK54_RS07935 and LRK54_RS07940 are separated by 29 nucleotidesLRK54_RS07940 and LRK54_RS07945 overlap by 1 nucleotidesLRK54_RS07945 and LRK54_RS07950 are separated by 1020 nucleotides LRK54_RS07930: LRK54_RS07930 - transposase, at 1,736,051 to 1,736,473 _RS07930 LRK54_RS07935: LRK54_RS07935 - dienelactone hydrolase family protein, at 1,736,758 to 1,737,420 _RS07935 LRK54_RS07940: LRK54_RS07940 - histidine kinase, at 1,737,450 to 1,738,502 _RS07940 LRK54_RS07945: LRK54_RS07945 - LytTR family DNA-binding domain-containing protein, at 1,738,502 to 1,739,206 _RS07945 LRK54_RS07950: LRK54_RS07950 - GIY-YIG nuclease family protein, at 1,740,227 to 1,740,649 _RS07950
Group Condition LRK54_RS07930 LRK54_RS07935 LRK54_RS07940 LRK54_RS07945 LRK54_RS07950
stress R2A with Calcium chloride 125 mM -0.0 -0.1 -1.0 -0.8 -0.6
stress R2A with Calcium chloride 125 mM +0.2 -0.4 -0.5 -0.7 -0.6
stress R2A with Uranyl acetate 2.5 mM -0.3 -0.4 +0.4 +0.5 -0.7
stress R2A with bismuth(III) chloride 0.03125 mM +0.2 -1.0 +0.5 +0.9 -0.7
stress R2A with Selective_ion_mix_1 1 X +1.3 -0.2 -0.3 -0.4 -0.2
stress R2A with silver chloride 1 mM +0.0 -0.3 +0.7 +0.8 -0.9
stress R2A with Nickel (II) chloride 0.3125 mM -0.3 +0.3 +0.7 +0.4 -0.6
stress R2A with beryllium sulfate tetrahydrate 1.953125 mM -0.1 -0.2 +0.7 +0.8 -0.8
carbon source D-Glucose (C) and 20 AA mix; 30C -0.3 -0.4 +0.7 +0.8 -0.2
carbon source D-Glucose (C); 30C -0.3 -0.3 +0.7 +0.8 -0.3
stress R2A with lead(II) chloride 0.625 mM -0.3 +0.1 +0.7 +0.8 -0.6
carbon source Gly-Glu 20 mM -0.2 -0.4 +0.8 +1.0 -0.5
stress R2A with Cesium chloride 3.90625 mM +0.2 -0.2 +0.8 +0.6 -0.6
stress R2A with Cesium chloride 3.90625 mM +0.1 -0.4 +0.9 +0.6 -0.4
carbon source D-Glucose 20 mM -0.4 -0.2 +0.6 +1.1 -0.0
carbon source acetate 20 mM -0.4 -0.9 +1.2 +1.6 -0.0
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.0 +0.2 +0.6 +1.0 -0.5
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM +0.7 +0.4 +0.8 +0.8 -1.1
stress R2A with Ferric chloride 1.5625 mM +0.4 -0.5 +1.1 +1.1 -0.4
anaerobic Anaerobic, acetate donor; nitrate electron acceptor +0.0 -0.1 +0.9 +1.4 -0.5
carbon source Gly-Glu 20 mM -0.3 -0.1 +1.0 +1.3 -0.2
pH R2A_PIPES pH 4 +0.2 +0.0 +0.9 +1.0 -0.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.7 -0.3 +0.4 +0.8 +0.3
carbon source D-Trehalose 20 mM -0.2 +0.0 +0.9 +1.4 -0.1
carbon source acetate 20 mM -0.2 -0.3 +1.3 +1.6 -0.2
stress R2A with Aluminum chloride 3.125 mM +0.1 +0.2 +1.2 +1.2 -0.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.0 +0.3 +0.8 +1.2 +0.3
stress R2A with ammonium iron(II) sulfate 2.5 mM -0.1 -0.4 +1.7 +1.6 +0.1
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors -0.3 -0.1 +1.8 +2.4 -0.2
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors +0.1 +0.1 +1.2 +1.8 +0.4
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