Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS07645 and LRK54_RS07650 are separated by 62 nucleotidesLRK54_RS07650 and LRK54_RS07655 are separated by 172 nucleotidesLRK54_RS07655 and LRK54_RS07660 are separated by 111 nucleotidesLRK54_RS07660 and LRK54_RS07665 are separated by 143 nucleotides LRK54_RS07645: LRK54_RS07645 - alpha/beta hydrolase, at 1,653,385 to 1,654,263 _RS07645 LRK54_RS07650: LRK54_RS07650 - serine protease, at 1,654,326 to 1,656,323 _RS07650 LRK54_RS07655: LRK54_RS07655 - TonB-dependent receptor, at 1,656,496 to 1,658,739 _RS07655 LRK54_RS07660: LRK54_RS07660 - glycoside hydrolase family 3 C-terminal domain-containing protein, at 1,658,851 to 1,661,082 _RS07660 LRK54_RS07665: LRK54_RS07665 - DEAD/DEAH box helicase, at 1,661,226 to 1,665,692 _RS07665
Group Condition LRK54_RS07645 LRK54_RS07650 LRK54_RS07655 LRK54_RS07660 LRK54_RS07665
stress R2A with bismuth(III) chloride 0.03125 mM +0.0 -0.1 -0.7 -0.3 -0.1
stress R2A with Nickel (II) chloride 0.3125 mM +0.1 -0.0 -0.4 -0.0 -0.3
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM +0.3 -0.1 -0.3 +0.1 -0.1
stress R2A with sodium bromide 250 mM +0.2 -0.0 -0.4 +0.2 -0.0
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM +0.5 -0.0 +0.0 -0.3 -0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.4 -0.1 -0.0 +0.0 -0.3
pH R2A_PIPES pH 4 +0.4 -0.0 -0.0 -0.3 +0.1
pH R2A_PIPES pH 4 +0.5 -0.0 -0.1 -0.2 +0.1
stress R2A with Cesium chloride 3.90625 mM +0.2 +0.1 -0.4 +0.2 +0.1
stress R2A with Chloride 250 mM +0.4 +0.0 -0.3 +0.2 -0.0
stress R2A with Nickel (II) chloride 0.3125 mM +0.6 -0.1 -0.2 -0.1 +0.1
stress R2A with Ferric chloride 1.5625 mM +0.3 +0.0 -0.3 +0.2 +0.1
stress R2A with Calcium chloride 250 mM +0.3 -0.1 -0.3 +0.4 -0.0
r2a_control R2A control +0.4 +0.0 -0.2 +0.2 +0.1
carbon source D-Glucose (C); 30C +0.6 +0.1 -0.1 -0.1 -0.0
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x +0.4 +0.0 +0.2 +0.1 -0.1
stress R2A with Aluminum chloride 3.125 mM +0.1 -0.0 -0.1 +0.7 -0.1
stress R2A_PIPES with Zinc chloride 640 uM +0.6 +0.0 +0.1 -0.0 +0.1
phage 2B-T1 +0.2 +0.1 +0.1 +0.1 +0.2
no phage control No phage control +0.2 +0.2 +0.1 +0.1 +0.2
phage 2A-T1 +0.2 +0.1 +0.2 +0.1 +0.2
phage 1A-T1 +0.3 +0.1 +0.1 +0.2 +0.2
carbon source Gly-Glu 20 mM +0.7 +0.2 -0.0 +0.1 -0.0
phage SA-T1 +0.4 +0.2 +0.1 +0.1 +0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.6 +0.1 -0.1 +0.2 +0.1
phage 2F-T2 +0.4 +0.2 +0.1 +0.1 +0.2
phage 2E-T1 +0.3 +0.1 +0.1 +0.2 +0.3
carbon source Gly-Glu 20 mM +1.0 +0.2 -0.0 +0.1 -0.0
phage 1C-T1 +0.4 +0.2 +0.2 +0.4 +0.2
stress R2A with Zinc chloride 0.625 mM +2.0 -0.1 -0.1 -0.1 +0.1
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